Jannaschia sp. CCS1: Jann_0997
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Entry
Jann_0997 CDS
T00330
Name
(GenBank) type II and III secretion system protein
KO
K02280
pilus assembly protein CpaC
Organism
jan
Jannaschia sp. CCS1
Pathway
jan02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Jann_0997
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
jan02044
]
Jann_0997
02035 Bacterial motility proteins [BR:
jan02035
]
Jann_0997
Secretion system [BR:
jan02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
Jann_0997
Bacterial motility proteins [BR:
jan02035
]
Pilus system
Pilus assembly proteins
Jann_0997
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
BON
Motif
Other DBs
NCBI-ProteinID:
ABD53914
LinkDB
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Position
complement(955609..957009)
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AA seq
466 aa
AA seq
DB search
MSMTNILRACLLGAAALLFQPISGAQAQGLRVVEGESTGTLRVPMNRAVVVEAEMLFAEL
SVANPAIADIATLSERSIYVLGRAPGRTTMTLLGADGSLIANVEIQVVPDVAELRERLRE
IIPGEPVEVRTANDGIVLSGTVGSAFAVDRAMELAERYAPGRISNLMMVGGQQQVMLQVR
FAEMQRTVRQELSASLGIGSTGGNFGTSVGAGNLQGGTGFGTGNLPGGLDGRNGGIGVSF
AAGGLQLSVLLEALESNGMVRTLAEPNLTALSGATASFLAGGQFPVPTESESGGTTIEFV
DFGVQLDFTPTVVGDHVINLALDAEISSIGEIIATTGAPAINTRNASTVVEMRDGDSFAI
AGLLQDDFTNSVAEVPWLGDLPVLGALFRSASYSRSQSELVIIITAHLVSPVNGEALALP
TDRVRIPTESELFFQGQVTGSSPRPGTAAGDVAQQDFSGSYGYVLD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgactaatattttgcgcgcgtgccttctgggcgcagccgcacttcttttccaa
cccatctccggcgcacaggcgcaaggacttcgcgtggtcgagggcgaaagcaccggcacc
ctgcgcgtgccgatgaaccgcgccgtcgtggtggaggccgaaatgctctttgcagagctc
tccgtggccaaccccgcaatcgcagacatcgcgacattgtcggagcgatccatctacgtt
ctgggccgcgcgcccgggcgcacaacgatgacgcttttgggggccgacggatccctcatc
gccaatgtcgaaattcaggtcgtccccgacgtggccgagctgcgtgaacgtctgcgcgaa
atcatccccggcgagccggtggaggttcgcaccgccaacgacggcatcgttctgtcgggc
accgtcggttctgcatttgcagtcgaccgcgcgatggaactggccgagcggtacgcgcca
ggccgtatttccaacctcatgatggtcggtggccagcaacaggtcatgttgcaggttcgg
tttgcggaaatgcagcgcaccgtgcgtcaggaactctccgcctcccttgggattggctcg
acgggtggcaatttcggtaccagcgttggtgccggtaacctgcagggcggcactggcttt
ggcaccggcaaccttcccggaggccttgacggccgcaacggcggaattggggttagtttt
gcggcgggcggtcttcaactgtcggttcttttggaagcgctggaatccaacggcatggtg
cgtaccctggccgagcccaatctgacggctctctcgggtgccacggcctccttcctggct
ggcgggcaattccccgtccccactgaatctgaaagtggtggcacaacgatcgaattcgtc
gactttggtgtgcagctcgatttcaccccaacagtcgttggcgatcacgtcatcaatctg
gcactggacgccgagatctcctcgatcggggaaatcattgcgaccaccggcgcaccggcc
atcaacacgcgcaacgcctccaccgtggtcgagatgcgcgacggcgacagcttcgcaatt
gcgggtctgttgcaggatgacttcaccaactccgtggcggaagtgccctggcttggggat
ttgccggttcttggcgcgctcttccgctccgcctcctacagccggtctcagtctgaactt
gtgatcatcatcaccgcgcatctggtcagcccggttaacggcgaggccctggcattgccc
acggaccgcgtccgcattccgaccgaaagcgaattgttcttccagggacaggtgactggc
agctcgccgcgccccggcacggccgcaggcgatgtggcgcaacaggatttctccggctcc
tatggctatgtgctggattga
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