Jannaschia sp. CCS1: Jann_1033
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Entry
Jann_1033 CDS
T00330
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
jan
Jannaschia sp. CCS1
Pathway
jan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Jann_1033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jan03400
]
Jann_1033
Enzymes [BR:
jan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Jann_1033
DNA repair and recombination proteins [BR:
jan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Jann_1033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
Flavi_DEAD
AAA_22
zf-CHY
MarR_2
AAA_16
nSTAND_NTPase5
AAA_5
DZR
Motif
Other DBs
NCBI-ProteinID:
ABD53950
LinkDB
All DBs
Position
984955..987153
Genome browser
AA seq
732 aa
AA seq
DB search
MDPMIEHFDEGDLVGVLTAEPLDRVLDYKAPAGGCWLGAFVEVPLGPRKVLGVVWGPGRG
DWDIAKVRSVNRVLDVAPMRAEMRKFLEKAGAYTLTPMSLMLRLATRVPGLSDPPSMRKV
YRLGQGTPDRVTPARTRVIEALVEYGGLAFTLKELSELAGVTSTVVKGLAKQGVVEEADT
PRDAPYLTLDPGLPGKELTEDQEIAADRLQEGSRARRYGAVLLKGVTGSGKTEVYLEAVA
ECLRQGRQALVLLPEIALTSEFLTRVKARFGADPAEWHSGVTMTERRRCWRMVGQGEAQL
VVGARSALFLPYRDLGLIVVDEEHDTSYKQDEGASYNARDMAVLRASLNEAQVVLASATP
SLETWSNAQAGKYTRLDLVSRFGPQDLPDMASIDMRLEDLPGGSWLSPSLTSAVGARLQA
GEQALLFLNRRGYAPVTLCRACGEMVGCDHCDARMVEHRFQKRLICHQCGETKPLPEVCP
SCGAEGKMAAVGPGVERIAEEAAAAFPDAKLAILSSDLFGSARALKAQIEELANGDTDLI
IGTQLVAKGHNFPRLTLVGVVDADLGLQGSDLRAAERTFQLMRQVAGRAGRADKPGQALL
QTFQPEHPVIRAILSGDEEGFWRTEAAEREAAGMPPYGRLAGIIISSTEAAAAFDLGTHL
ARNDGPIREAGGIVYGPAPAPIARVRGRHRVRLLVKAPKGVALQPALSRWTHGLKLPGHL
RLAIDIDPQNFF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggaccccatgattgagcattttgatgaaggcgatttggttggggttctgacggcagag
cccctggaccgcgtgcttgattacaaagcgcccgcaggggggtgctggttaggcgcgttt
gtggaagtgccgctgggtccgcgcaaagttctgggcgtggtctgggggccggggcggggc
gattgggacattgccaaggttcggtctgtcaaccgggtgctggacgtggccccgatgcgg
gccgagatgcggaagtttctggaaaaagcgggggcttacacgctgacgcccatgtcgctg
atgctgcgtctggccacgcgggtgccgggcctgagcgatccgccgtcgatgcgcaaggtc
taccgtctggggcagggcacgccggaccgggtgacgcccgcgcgcacccgggtgatcgag
gcgttggtggaatatggtggcctcgccttcacgttgaaggagttgagcgaactggccggc
gtcacatcgacggtcgtgaagggtcttgccaagcagggcgtggtggaagaggcggacacg
ccccgcgatgccccctacctgacgctcgaccccggcctgcccggcaaggaattgaccgag
gatcaggagattgccgccgatcgtttgcaggagggatcgcgcgcccggcgctatggggcg
gttctgctgaaaggtgtgaccgggtccggcaagacggaagtgtatctggaggcggtcgcg
gaatgcctgcgtcaggggcgtcaggcgcttgtactgttgccggaaatcgcgctgacctct
gaattcctgacccgcgtgaaggcacgcttcggggccgatccggcggagtggcattccggc
gtcaccatgaccgaacgccgccgctgctggcgcatggtcgggcagggggaggcacagttg
gtcgtcggcgcgcgatccgcgctgtttctgccctaccgggaccttgggttgatcgtcgtg
gatgaggaacacgacacttcctacaagcaggacgaaggggccagctacaacgctcgcgat
atggccgttctgcgcgcgtccctgaacgaggcgcaggtggttttggcgtctgccacgccg
tcgttggagacgtggtccaacgcgcaggcgggcaaatacacgcgccttgatctggtgtcc
cggttcgggccccaggatctgccggatatggcatccatcgacatgcggttggaagatctg
ccggggggctcctggctgtcaccttcgctgacatccgccgtaggggcgcggttgcaggcg
ggtgaacaggcattgttgttcctgaaccgtcgtggctacgcgcccgttaccctgtgtcgc
gcctgcggagagatggtgggctgcgaccattgtgacgcgcgcatggtggaacatcggttc
cagaaacgcctgatctgccaccaatgcggcgagaccaaacccctgccggaggtctgcccc
tcctgcggggcggagggcaagatggccgcggtcggcccgggtgtggagcggatcgcggaa
gaagccgccgccgcctttcccgatgcgaaattggcgatcctgtcgtccgacctgttcggc
tcggcccgggcgttgaaagcgcagattgaggaactggcgaacggcgataccgacctgatc
atcggcacgcaattggtggccaaagggcacaacttcccgcgcctgacgctggtgggtgtc
gtggatgcggatttgggcctgcaaggatcagatttgcgcgcggcagagcggacgttccag
ctgatgcggcaggtggcggggcgggccggtcgtgccgacaagccgggccaagcgctgttg
cagacgttccagcccgaacatccggtgatccgcgcaatcctgtcgggcgatgaagagggg
ttctggcgtacggaagcagcggagcgggaggcggctggcatgccgccctatggtcgtctc
gcggggataattatctccagcacggaagccgccgctgccttcgacctcggcacgcatctg
gcccgcaacgatggcccgatccgtgaggcgggcggtatcgtctatggcccggccccagcc
cccatcgcccgtgtgcgcggcaggcaccgggtgcgacttctggtcaaggccccaaagggt
gtcgcgctgcaaccggccctaagccgttggacccacgggctaaaactgcccggccatctg
cgacttgccatagatatcgacccgcagaacttcttctga
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