Jannaschia sp. CCS1: Jann_1256
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Entry
Jann_1256 CDS
T00330
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
jan
Jannaschia sp. CCS1
Pathway
jan00061
Fatty acid biosynthesis
jan00071
Fatty acid degradation
jan01100
Metabolic pathways
jan01212
Fatty acid metabolism
jan02024
Quorum sensing
jan04146
Peroxisome
Module
jan_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Jann_1256
00071 Fatty acid degradation
Jann_1256
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Jann_1256
09145 Cellular community - prokaryotes
02024 Quorum sensing
Jann_1256
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
jan01004
]
Jann_1256
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jan04147
]
Jann_1256
Enzymes [BR:
jan01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Jann_1256
Lipid biosynthesis proteins [BR:
jan01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Jann_1256
Exosome [BR:
jan04147
]
Exosomal proteins
Exosomal proteins of breast milk
Jann_1256
Exosomal proteins of breast cancer cells
Jann_1256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABD54173
UniProt:
Q28SY9
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All DBs
Position
1212170..1213891
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AA seq
573 aa
AA seq
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MSQSNRPWTAYYGPSMRTEIETAQFRTIGDMIAAVSHLYKDQPAFTACLPNGMNGTLTFS
QVDEMSDGLAVYLRETAGLKQGDRVAVQMPNGLSFPVAAFAILKAGCVLVNVNPLYTAEE
MAHQFADAEPKALIVVDIFADKLTQALKGHPIPNIIVTQVAEFFPAMPRGIVRLVQRHWD
RTLAPITLPHIRLPDAIEAGKQDSASKSISAEGYRSALSSDDIACLQYTGGTTGVPKGAM
LTHANLMMNMEQTMEMISNVEKGREVALTALPLYHIFAFTVNLLGFYYLGARNVLIPNPR
PLSNLKRAFENYPITWMSGVNTLFNGLSKEVWFQDTPPKHLKFASAGGMALQSSVAERWE
EVSGKPVLQGYGLTESSPVMTFNPLGKTRPGSIGIPVPSTELRCLDDDGTEVPQGEAGEI
AARGPQIMKGYWNKPEETAKTMHGDWLLTGDIGVMDADGYFSIVDRKKDMVLVSGFNVYP
NEIEDCLVRHPGIMEAAVIGVPDGASGEAVKALVVLHDQTLTPDAIRAYCKEHLTAYKVP
KAVEFRDDLPKSNVGKILRKDLRSEQAPLRDAS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatcaaaccgtccatggactgcatattacggcccgtccatgcggaccgagatc
gagaccgcgcagttccgcacgatcggcgacatgattgccgccgtttcgcatctgtataag
gatcagcctgcgttcacggcctgtttgcccaacgggatgaacggcacgctgaccttcagc
caggtcgacgagatgtccgatgggctggcggtctatctgcgcgaaacggcgggcctgaag
cagggcgaccgtgttgcggtgcaaatgcccaacgggttgtccttccccgtggccgcattc
gcgatcctgaaggccgggtgtgtcctggtgaacgtaaacccgctctatacggccgaggaa
atggcgcatcaattcgcggatgccgagcccaaggcgctgatcgttgtggatatctttgcc
gataagttgacccaggccctcaaggggcacccgatccccaatatcatcgtcacccaggtg
gccgagttctttccggccatgccacgcgggatcgtgcggctggtccagaggcattgggac
cgcacccttgcgccgatcaccctgccgcatatccggctgccggacgcgattgaggcgggc
aaacaggacagcgcgagcaaaagcatatccgccgaaggatatcgcagtgcgctgtcgtca
gacgatatcgcctgcctgcaatataccggaggcaccacgggcgtgcccaagggtgcgatg
ctgacccatgcgaacctgatgatgaacatggaacagaccatggagatgatcagcaacgtc
gagaagggccgggaggtcgcgctgacggcgctgccgctctatcatatctttgcgttcacg
gtgaatttgctggggttctactatctgggggcccgcaacgtcctgatccccaatccgcgc
cccctcagcaacctcaagcgggcgttcgagaattatccgatcacgtggatgagtggtgtg
aacacgctgttcaacggtctcagcaaggaggtttggttccaagacacgccgcccaaacac
ctgaaattcgcctctgccggtggcatggcgctgcaaagctccgtcgccgaacggtgggag
gaggtcagcggcaagccggtgctgcaaggctacgggctgacggaatcctctccggtcatg
accttcaatcccctgggcaagacccgccccggctccatcggtatcccggtcccgtcgacc
gagctgcgctgtctggatgatgacggcaccgaagtgccccagggtgaggccggagagatc
gcggcgcgcggcccccagatcatgaagggctactggaacaagcccgaggagacggccaaa
acgatgcacggagactggcttctgaccggcgatatcggtgtcatggatgcggatggatat
ttctccatcgtggatcgcaagaaggacatggtgctggtctcgggtttcaacgtctacccc
aacgagatcgaagattgcctggtccgccaccccgggatcatggaggctgcggtgatcggc
gtgcctgacggtgcgtcgggcgaggcggtcaaggcgctggtggtgttgcatgaccagacg
ctgacgccggacgccatccgcgcctactgcaaagagcatctgaccgcctacaaagttccc
aaagcggtcgaattccgcgacgatctgccgaaatcgaatgtcggtaagatcctgcgcaag
gatctgcggtcggaacaggccccactgcgcgatgcgtcctag
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