Jannaschia sp. CCS1: Jann_1260
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Entry
Jann_1260 CDS
T00330
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jan03000
]
Jann_1260
Transcription factors [BR:
jan03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Jann_1260
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_24
DUF5682
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ABD54177
UniProt:
Q28SY5
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Position
1218977..1219855
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AA seq
292 aa
AA seq
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MAEFNYHHLRYFWAVAHDGNLTRTAARLNLSQSAVSVQIKQLEASLGHRLFERRGRQLVL
TEAGRIALDHADAIFAAGRELIGTLQEKDRSRQAIRIGALATLSRNFHLKFLQPILGRQD
VEIILRSGTNVNLLQALEAHNLDVVLINRPPSRDAITPFVSHRLSEQPVSLVGTPALLGD
TPDLNDLLAHQPIILPTADTDVRIGFDALTERIGIRPQIVAEVEDMAMMRLLAREGVGLA
VLPPIVVQDELKTGRLIEADRLPGIGETFYAVTLTRRFPNPLLSELLEDRAL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggcagagttcaattatcaccatttgcgatacttctgggcggtcgcccatgacggcaac
ctcacgcggacggcggcgcggctcaacctgtcgcaatctgccgtctccgttcagatcaag
cagcttgaggcgtccctggggcatcggttgtttgagcggcgcggtcgtcagcttgtcctg
accgaggcgggccggatcgcgctggatcatgcggatgcaatctttgccgcggggcgcgag
ttgattggcacgcttcaggaaaaagaccgtagccgccaagccatccggatcggcgcgttg
gcgaccctgtcgcgcaattttcatctgaagtttttgcaacccatccttggccggcaggat
gtggagatcatcctgcgctccggcacgaatgtgaacttgttgcaggcgctggaagcgcac
aatctggacgtggtcctgatcaatcgcccgccttcgcgcgacgccatcacgccattcgtg
tcccaccgcctgtccgagcagccggtcagcctggtgggcacgcctgctttgctgggagat
acgcctgatctgaatgacctgctggcccatcagccgatcatcctgcccaccgccgacacc
gacgtgcgcattggatttgacgcgctcaccgagcggatcggcatccggccccagatcgtc
gcggaggtcgaggacatggcgatgatgcgccttctcgcgcgggagggggttggtctggcg
gtcctgccgcctatcgtggtccaagacgagctgaaaaccggacggttgattgaggcggac
cgtcttcccggcattggtgagacgttctatgcggtcaccctgacacgccgtttcccgaac
ccgctgctgtcggaattgctggaagaccgcgcgttgtag
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