Jannaschia sp. CCS1: Jann_1585
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Entry
Jann_1585 CDS
T00330
Name
(GenBank) transcriptional regulator, LysR family
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jan03000
]
Jann_1585
Transcription factors [BR:
jan03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Jann_1585
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
ABD54502
LinkDB
All DBs
Position
complement(1566395..1567315)
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AA seq
306 aa
AA seq
DB search
MNNLTIKQLRYVDALARHGHFGHAAAACNVTQPALSMQIKEMEEAFGLPLFERTPRQVRL
TGFGETVLTRAKDILRAVDELDDLARAARGGLTGRLRLGVIPTIAPYLLPRLIGTLGLHY
PQIDLHIRETLTPRLLEDLSAGRLDTAILALPVSVPALTEVPLHDEEFVLVRPAEDDDKP
VPDGEALAQMRLLLLEEGHCFRDQALSFCNIRSSLPREGLDGSSLSTLVQMVGAGIGVTL
IPDMAVGVETRSATVSVARFAQATPKRTIGMVWRKASPLATELEGMAEVVRTAIMPEGLC
VGPTPG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctcacgatcaaacaattgcgctacgtcgatgccttggcccgccacgggcat
ttcggccatgcggcggcggcgtgcaatgtgacgcaaccggccttgtcgatgcagatcaag
gagatggaggaggcgttcggcctgccgctgtttgagcgcacgccccggcaagtgcgcctg
accgggttcggcgagactgtgctgacccgcgccaaagacatcctacgcgcggttgatgag
ttggacgatctggcccgcgctgcccgtggcgggctgacggggcggctgcggttgggcgtg
atcccgaccatcgcgccctacctgttgccgcgcctcatcggcactctggggctgcattac
ccgcagatcgacctgcatattcgggaaactttgacgccgcgcctgttggaggatttgtcc
gccgggcggctggacaccgcgatcctggcccttcccgtgtccgtgcccgcgttgaccgag
gtgccgctccatgatgaggaattcgtcctggtgcggcccgccgaggatgacgacaagccc
gttcccgatggcgaggcgctggcccagatgcgcttgcttctgctggaggaagggcattgc
ttccgcgaccaagcgctgagtttttgcaacattcgcagcagcttaccgagagaggggctc
gacggctccagcctgtcgacattggtgcaaatggtcggcgcaggcattggcgtgacgctg
atccccgatatggcggtgggggtagagacgcggtccgccaccgtctccgtggcgcgattt
gcgcaggcgacccccaaacggaccatcggcatggtctggcgcaaagccagccctttggcg
actgagctggaaggcatggcggaggtcgtccgcacagccataatgccggagggcctctgc
gtgggcccgacgcccgggtaa
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