Jannaschia sp. CCS1: Jann_1820
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Entry
Jann_1820 CDS
T00330
Name
(GenBank) ABC transporter related protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
jan03012
]
Jann_1820
Translation factors [BR:
jan03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Jann_1820
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
ABC_tran_CTD
AAA
AAA_29
TsaE
RsgA_GTPase
MMR_HSR1
nSTAND3
AAA_18
AAA_23
NACHT
AAA_22
CENP-O
AAA_13
RNA_helicase
ATP-synt_ab
DivIC
Hist_deacetyl
Motif
Other DBs
NCBI-ProteinID:
ABD54737
LinkDB
All DBs
Position
complement(1809180..1811027)
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AA seq
615 aa
AA seq
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MLRMSDIGYSVAGRSLLEGASVTIPAGHKVGIVGRNGTGKTTLFRIIRGELGLDTGEITL
PAGTKIGGVAQEVPSSETSLIDTVLEADTERAELLADTSEDPTRIADVQARLADIDAWGA
EARAATILRGLGFSHADQQRPCSAYSGGWRMRVALAGVLFSQPDILLLDEPTNYLDLEGA
LWLEAYLAKYPHTVLIISHDRGLLNRAVGHILHLADKTLTYYTGGYDTFAKTRAERRAVQ
AAAAKKQDLQRAHLQSFVDRFKAKASKAKQAQSRVKMLERMETIRAPEDAARTVFTFPEP
EELSPPIVAMDNAAVGYTETPVLKRLNLRLDQDDRIALLGRNGQGKSTLSKLLAGKLQTM
EGRITSSSKLRIGYFAQHQVDELHLDETPLDHLRRERPEDAPPKLRARLAGFGLGADQAE
TIVAKLSGGQKARLSLLLATLEAPHLLILDEPTNHLDIESREALVEALTAYTGAVILVSH
DMHLLSLVADRLWLVQDGHVAPYANDLETYRKSLLGTEPKSQKQDKPKAKPKQLSHDQIK
ELRAELKKAEARVEKIEDMREKLAKKLADPALYEDTRVGELTTWQKKYAEVMDGLARAET
LWEKAADALDRAQPR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcatgtctgatatcgggtactctgtcgccggtcgctctctgctggagggcgcc
tctgtcaccattcctgcgggccacaaggtgggcatcgtgggccggaacgggacgggcaag
actacgcttttccgcatcattcggggtgaattgggtctggataccggcgaaatcaccctg
cccgcgggcacaaagatcggcggcgtagcgcaagaagtgccctcgtccgagacatccctg
atcgacacagttctggaggccgacacggagcgcgccgagcttctggccgacacatccgag
gacccgacccgcatcgcagatgtccaggcccgtctggccgacatcgacgcctggggggcc
gaagcgcgcgccgccacgatcctgcgcggccttgggtttagccacgccgaccagcaacgc
ccctgctccgcctattccggcggctggcggatgcgtgtagcgctggccggtgtcctgttt
tcgcaacccgatatcctgctgctcgacgagccgaccaactatctggatctggaaggtgcg
ctgtggctggaggcttatctggccaaatacccccacacggtcctgatcatctcccacgac
cgcggcctgctgaaccgcgctgtcggtcacatcctgcacctcgccgacaagacgctgacc
tactatacgggcggctatgacaccttcgccaagacccgggccgagcgacgcgctgtgcag
gctgcggcggcaaagaagcaagacctgcaacgggcgcatctgcaaagtttcgtggaccgc
ttcaaggccaaggcctccaaggcgaaacaggcgcaatcacgcgtgaagatgctggaacgg
atggagacgatccgcgcgcccgaagatgccgcgcgcaccgtcttcacctttccggagccc
gaggagcttagcccgcccattgtcgccatggacaacgccgccgtgggctacaccgaaacg
ccggtcctcaagcgcctgaacctgcgcctggatcaggacgaccgcatcgcgcttctgggc
cgcaacggccaagggaagtcgacgctatcgaaactgctcgcgggcaagctgcaaacaatg
gagggacgcatcacgtcctcttccaaactgcgcatcggctacttcgcgcagcatcaggtg
gatgagctgcatctggacgagacgccactggatcacctgcgccgtgaacggcccgaagac
gccccgccgaaactgcgcgcacgcctcgcgggtttcggtctgggcgcggatcaggccgaa
acaatcgtcgccaagctgtcgggtggccaaaaggcgcggctcagcctgctgctcgcgacg
ctagaggccccgcaccttttgatcctcgacgagccgaccaaccacctcgatatcgaatcc
cgcgaagcgctggtcgaagccctcaccgcctacaccggggcggttatcctcgtctcccac
gacatgcatctcctgtccctggtcgccgaccgcctctggctggttcaggacggccatgtc
gcgccctatgccaatgacttggagacctaccgcaagagccttctgggcactgagcccaaa
tcccaaaagcaggacaaaccgaaagcaaaacccaagcaactctcccacgatcagatcaag
gagctgcgcgcggagcttaaaaaagctgaagcccgcgtggagaagatagaagacatgcgc
gaaaagcttgccaagaagctcgctgaccccgcgctctatgaagatacccgcgtgggcgag
ctaaccacttggcaaaagaaatacgccgaagtcatggatgggctcgcccgcgccgaaacg
ctgtgggagaaggccgccgatgcattggaccgtgcgcagccgcgctaa
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