Jannaschia sp. CCS1: Jann_2079
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Entry
Jann_2079 CDS
T00330
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
jan
Jannaschia sp. CCS1
Pathway
jan00260
Glycine, serine and threonine metabolism
jan00460
Cyanoamino acid metabolism
jan00630
Glyoxylate and dicarboxylate metabolism
jan00670
One carbon pool by folate
jan00680
Methane metabolism
jan01100
Metabolic pathways
jan01110
Biosynthesis of secondary metabolites
jan01120
Microbial metabolism in diverse environments
jan01200
Carbon metabolism
jan01230
Biosynthesis of amino acids
jan01240
Biosynthesis of cofactors
jan04981
Folate transport and metabolism
Module
jan_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Jann_2079
09102 Energy metabolism
00680 Methane metabolism
Jann_2079
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Jann_2079
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Jann_2079
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Jann_2079
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Jann_2079
Enzymes [BR:
jan01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Jann_2079
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Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_1_2
SelA
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ABD54996
UniProt:
Q28QL6
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All DBs
Position
2087343..2088680
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AA seq
445 aa
AA seq
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MVLAKRDWVPADSDALVQSIAARTSASDGATIAARLTALGAENRRIHEDACFNLNPATNV
MNPAAEALLSNGMGTRPSLGYPGDKYEMGLEAVEEAEVIAAELAAEVFRARFAEIRVASG
AMANLYAFMATCQPGDTIIVPPASIGGHVTHHGAGCAGLFGLRIVEAPVYPNCYTIDIPG
LADLAAKERPALITLGGSLNLLPHPVAEVRAIADDVGAYLLMDAAHQCGLFAGQAWPDPL
ASENGAEGAHLMTMSTYKSLGGPAGGLIVTNDAEIAKRLDSIAFPGMTANFDASKSAALA
RSLLDWRDHGRAYAAKMVEVAKALSDALKAQGIPLFETARGATQSHQFAVPAYELGGGQA
ASKHLYRAGIIACGIGIPGPEVPNDMNAIRFGTPEIVRFGVGQGSDDVTTLAGLIARALR
SDRPEDLAGETAAFRSNFKALHYVS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggtattggcaaaacgcgactgggtgcccgcagacagtgacgccctggttcaatccatc
gccgcacgcacgtcggcgtcggacggcgccaccatcgccgcgcggcttacggctttgggg
gccgagaaccgccgcattcatgaggacgcctgcttcaacctcaaccccgccaccaatgtg
atgaacccggcggcggaggcgcttttgtccaacggcatgggcacgcgcccgtcccttggc
taccccggcgacaaatatgagatggggctggaggcggtggaggaggcggaggtcatcgcc
gcagaactggccgctgaggtcttccgcgcgcgctttgctgagattcgcgtggcctccggc
gcgatggccaacctctacgcctttatggcgacctgccaacccggcgacacaatcatcgtg
ccgcccgcatccatcggcggccatgtcacccaccacggggctggatgcgcgggccttttc
ggattgcggatcgtggaggcccccgtttatccaaattgttataccattgatatacccggc
ctcgcggatctggcggcaaaagagcgcccggcgctgatcactttgggtgggtccctgaac
ctgttgccccatcctgtggcggaggtgcgggctattgccgacgacgtcggggcctatctg
ctgatggatgccgcgcatcaatgcggcctctttgctgggcaggcctggcctgatccactg
gcctctgaaaatggggcagagggcgcgcatctgatgacgatgagcacctataaatccctc
ggcggacctgcgggcgggttaatcgtgaccaacgacgccgagatcgccaagcgtctggat
tccattgcttttcccggcatgacggccaatttcgatgcctccaaatccgccgccctcgcg
cgcagcctgttggattggcgcgaccatggccgggcctacgccgccaagatggtggaggtg
gcgaaggcgctgtccgatgcgctgaaggcacagggcattccgctgtttgaaacggcacgc
ggtgccacgcaaagccaccaatttgccgtgccagcctatgagctcgggggcgggcaggcg
gcctccaaacacctttaccgcgcggggatcatcgcctgtgggatcggcatcccgggccca
gaagttcccaatgatatgaatgcgatacgttttgggacacccgaaattgtccgctttggc
gtggggcaggggtcggatgatgtcaccaccctggcaggcctcattgcgcgggctctgcgc
agtgatcgaccagaggatcttgccggggaaacagccgcctttcggagcaatttcaaagcc
ttgcactatgtatcttaa
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