Jannaschia sp. CCS1: Jann_2507
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Entry
Jann_2507 CDS
T00330
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
jan
Jannaschia sp. CCS1
Pathway
jan04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Jann_2507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jan03016
]
Jann_2507
Enzymes [BR:
jan01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Jann_2507
Transfer RNA biogenesis [BR:
jan03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Jann_2507
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
QueC
NAD_synthase
Arginosuc_synth
DUF7411
ATP_bind_3
ThiI
Motif
Other DBs
NCBI-ProteinID:
ABD55424
UniProt:
Q28PD8
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All DBs
Position
2506754..2507896
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AA seq
380 aa
AA seq
DB search
MALDRSDGLNSLGFAKAPADTRVVVAMSGGVDSSAVAAQLADEGYDVVGVTLQLYDHGAA
LAKKGACCAGRDIHDAARVAETMGFPHYVLDYENVFKDAVIDEFADSYLAGATPVPCIRC
NERVKFKDLLETAKDLDADCMATGHYIQRKMGREKAELHSAADAARDQSYFLFSTKQEQL
DFLRFPLGHLESKAETRALAAKYGLSVADKPDSQDICFVPNGNYAAVIEKLRPGAADPGE
IVDIDGNVLAMHRGVIHYTIGQRRGLGIGGLDDPLYVVKLDPDTRRVIVGPKEMLSTRTV
PVREINWLGDTPFDSQQEWQMDVKIRSTRPPRGAVIRPVSATEAEVELIVAEEGVSPGQA
CVFYAPEGGRIFGGGWIHKG
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggcactcgaccggtctgatggcctcaattcgctcggctttgccaaagcgcccgctgac
acgcgcgttgtcgtggcgatgtcgggcggcgtggattcgtctgcggtggcggcacagctg
gcggatgagggctatgatgtcgtgggggtcacgttgcagctctatgatcacggcgcggcg
ctggccaagaagggcgcgtgctgtgcgggccgtgatatccatgatgccgcccgtgtggcc
gaaacgatgggcttcccccactacgttctggattatgagaacgtgttcaaagacgccgtg
atcgatgaattcgccgacagctatttggccggggccacgcctgtgccctgcatccgctgc
aacgaacgggtgaaattcaaggatctgctggagacggccaaggatctggacgcggattgc
atggccacgggccactacattcaacgcaagatgggccgcgagaaggcggagcttcattcc
gccgccgatgccgcgcgcgatcagtcctatttcctgttctccaccaagcaggagcagctg
gatttcctgcggttccccttggggcatctggaaagcaaggccgagacgcgggcgctggcg
gcgaaatatgggctgagcgtggccgacaagcccgacagccaggacatttgcttcgtgccc
aacggcaactatgccgctgtgatcgaaaaactgcgccccggcgcggctgatcccggtgag
attgtggatatcgacggcaacgtactggccatgcatcgtggcgtgatccactacaccatt
ggtcagcggcgcggtcttggcatcggcgggctggatgacccgctttacgtcgtgaagctg
gaccctgacacccgacgcgtgatcgtcggcccgaaagagatgctgtcgacccggacggtg
ccagtgcgagagatcaactggcttggggatacgccgttcgacagtcagcaggaatggcag
atggacgtcaaaatccgctccacccgcccgccgcgcggtgcggtgatccggccggtgtcg
gcgaccgaggcggaggtggaactgatcgtcgccgaagagggcgtcagccccggacaggcc
tgcgttttctacgcgcccgaaggcgggcggatcttcgggggcggctggatccacaagggg
tag
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