Jannaschia sp. CCS1: Jann_2542
Help
Entry
Jann_2542 CDS
T00330
Name
(GenBank) periplasmic sensor signal transduction histidine kinase
KO
K10125
two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:
2.7.13.3
]
Organism
jan
Jannaschia sp. CCS1
Pathway
jan02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Jann_2542
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
jan01001
]
Jann_2542
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
jan02022
]
Jann_2542
Enzymes [BR:
jan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Jann_2542
Protein kinases [BR:
jan01001
]
Histidine kinases
NtrC family
Jann_2542
Two-component system [BR:
jan02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
Jann_2542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
dCache_1
HATPase_c_2
HATPase_c_5
HEAT_Nup120
DUF6457
Diacid_rec
VC2046
DUF6291
Motif
Other DBs
NCBI-ProteinID:
ABD55459
UniProt:
Q28PA3
LinkDB
All DBs
Position
complement(2546197..2547963)
Genome browser
AA seq
588 aa
AA seq
DB search
MSFADRPASPPRRGIRRPWVLRALIVLFLGGAIAIIWISNIWLTERFTETTRNRAEVRLA
LYSGSVMSEIRRHQVVPLLLSRDPSLIRSLEANDYTQTTQYLISYVEDIGAASILLLDRE
GRVVAATDRARISERRDTDPFFVEATRSPNTVFTSNEPETGRFDFTFSRRIENGDGLLGV
ILVEIDLARLVDRWRGASEAVFLANSQGDIILSTEARWRGRTEIEAMALRDPPSAIQRAL
EGAGNWAFGDPDPNFFGAATIRLEARIPFRGWRIVSYTAYTSVRERVNGVLALEIMGFAL
ALAAAFYLLSRQARSQTAVLARESAELRRLNGRLQREIAERQRVERTLEEAELSLQQSQK
LAALGEMSAAVSHELNQPLAAMKTYLAGARLLLQRKRTEEAASSFQRIDDLIERMGAITR
QLKSYARKGGDALEPVDMRDALKGALTMMEPQLRSDTVHITQSLPRKPALVMADRLRLEQ
VIINLLRNALDAMGGADEKELDLIIVEGDEVVLTVRDSGPGIDDLDALFEPFYTTKKPGE
GVGLGLAISSGIVKDLGGRLSARNGEQEGAVFEIRLPALDEAQSEAAE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgctgatcgtcccgcatccccgccccggcggggcattcgccgcccctgggtg
ctgcgcgcgctgatcgtgctgtttctgggcggtgcgatcgcgatcatctggatctccaac
atctggctgacagagcggttcaccgagacgacgcgcaaccgtgcggaggtgcggctggcg
ctctattccggctcggtcatgtccgagatccggcgccatcaggttgtgcccctgctcctg
agccgcgacccctccctgatccggtcgctggaggccaatgactacacacagaccacgcaa
tatctgatctcctacgtggaggatatcggcgcggcgtcgatcctgcttctggaccgtgag
gggcgggttgtggcggcgacagaccgtgcgcgcatttccgagcggcgcgacacggaccct
ttctttgttgaggccacacggtcgccgaacaccgtgttcacctccaacgagcccgaaacg
gggcgctttgatttcaccttctcgcgccggatcgagaacggtgatggcctgctgggtgtc
atcctggtggaaattgacctggcccgcctggtcgaccgctggcgcggcgcgtcggaggcg
gtgtttctggccaattcccagggcgatatcatcctgtcgacagaggcgcgctggcggggc
cgcacggagattgaggcgatggccctgcgcgacccgccctcggccattcagcgcgcgttg
gaaggggcggggaactgggcgttcggcgaccctgaccccaacttcttcggcgcggccacg
atccggctggaggcgcgtatcccgtttcgcgggtggcgcatcgtcagctacacggcctac
acgtcggtgcgggagcgggtgaacggggtcctggcgctggagattatgggattcgccctg
gcgctggccgccgcattttacctgctgagccgtcaggcccggtcacagacggcggtgctg
gcgcgcgagtcggcggagttgcgccgcctcaacgggcgcctacagcgagaaattgccgaa
cgtcaaagggttgaacggaccctggaggaggcggaactgagccttcagcagagccaaaaa
ctggccgcattgggggagatgtcggccgccgtctcgcacgagttgaaccagccgctggcg
gcgatgaaaacctacctcgccggggcgcggcttttgttgcagcgaaaacgcaccgaggag
gccgcctccagcttccagcggatcgatgacctgatcgagcggatgggcgccatcacgcgg
cagctgaaatcctatgcccgcaagggcggagatgcccttgagccggtcgatatgcgggat
gctctgaagggcgctttgacgatgatggagccgcaattgcgcagcgacacggtccacatc
acgcaaagcctgccgcgcaagccggccctggtcatggccgaccgtctgcggctggagcag
gtgatcatcaatttgctgcgcaatgcgctggacgcgatgggcggggccgatgagaaggaa
ttggacctgattatcgtggaaggtgacgaagttgtgttgaccgtgcgcgacagcggaccg
gggattgacgatctggatgctttgttcgagccattctacacgacaaagaaacccggagag
ggggttggtcttgggctggccatctcctcggggatcgtgaaagaccttggcgggcgtctg
tcggcgcgcaacggggaacaggaaggcgcggtgtttgagatccgtctgcctgcgctggat
gaggcgcagagtgaagcggcggaataa
DBGET
integrated database retrieval system
