Jannaschia sp. CCS1: Jann_2616
Help
Entry
Jann_2616 CDS
T00330
Name
(GenBank) AMP-dependent synthetase and ligase
Organism
jan
Jannaschia sp. CCS1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
NAD_binding_4
Epimerase
PP-binding
RmlD_sub_bind
GDP_Man_Dehyd
GH3
NmrA
Motif
Other DBs
NCBI-ProteinID:
ABD55533
UniProt:
Q28P29
LinkDB
All DBs
Position
complement(2635047..2637761)
Genome browser
AA seq
904 aa
AA seq
DB search
MSDRDRTVTYGGLGQFATQLGVHLETPQVVGVFGAPGVAMAASAVACVVHGRPFVHLDPA
MPQMVLHNIVSELQVSLIVTCQRADPGQLPRDCATIDANDLLNAAPAPYAPLQAAPVAPD
DPIYLVATSGTTGRPKCIPVAQDAAYLSYAWRDAFTPYGPDTRVGIYVFAIWEMFRPLRK
GAGLWFPDASTLFAPGQLADFLIAHDIDEMLFTPSFYDTFLNALDGDKAAALPLSRVILN
GEVVGDDLIIASLAKLPGTALWNLYSICETHDVCMSHLTEPAGDGPASVGVPMEHLRAVI
LDQADAPCPPGTSGQLHFEGPRMLGPGYVNRPEETRLRFREVTLQGRETRLYDTGDQAWV
DATGALHIEGRIAHMLKLRGFSVQTRELTDTMRDRLAFSSAAPWVAEVGARGQSLIFYFA
ADAAQARRNAEQWGLKAGTNKMPAALAADLRAVLPAYCVPSFLVQMDALPLHPVSGKADL
RALPAVEEDDHGSDFAEDAVIAAAALAMSCAPSQIDPALSFHDQGGDSLMCVTLMLELEK
TYGLPIDFDLAMNVPLHRLDQLMTQEADAPAPAEDFGRPGILLTGATGFLGGHVLAKAAR
DLPEGEVVYCLVRDKNRGARDRLDEAAQSHGVAPDRYVIVHGTLDAPRFALEADAYAALS
GSVSRVIHCAAMVNLAIGRQEMLDWSARGMDTVLTFCADARADLRFTSSSAVFPDRGGPW
PEAPATPWDGCTGYGAAKIAAEAAIRAADIPAAIVRLPSLYDLDAPNPRDIYEIILKASL
RAGHMPQALEFPMTDVTAAAAFLLGPITAPDAPIYNLMADARIAPDDPNALPATDWLARV
TLDPGIAKVIADFPDTLCASSDFENTAARAAWERVSALPFNEISDSEALLTRRARDYQSD
PALT
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatcgcgatcgcacggtcacctatggcgggcttggccagttcgcgacacaactg
ggcgtgcatctggaaacgccgcaggttgtgggcgtctttggcgcgccgggcgttgccatg
gcggcgagtgcggtggcctgcgtggtccatggccgcccctttgtgcaccttgacccggcc
atgccgcagatggtgctgcacaatatcgtctcggaattgcaggtcagcctgattgtcacc
tgccagcgcgcggatccggggcagctgccccgcgactgcgccacgatcgacgccaatgac
ctgctgaatgccgcgcccgcgccgtatgctccgctgcaagcggcccccgttgcgccggac
gatcccatctatctggtggccacgtccggcacgacggggcgccccaagtgcattcccgtg
gcccaggacgcggcctatctgtcgtatgcttggcgcgacgcgttcacgccctacggcccg
gacacgcgcgtcggtatctatgtcttcgcgatctgggagatgttccgcccgctgcgcaag
ggggcggggctgtggtttcccgatgccagcacgttgttcgcgccgggacagctggccgat
tttctgatcgcccacgatatcgacgagatgctgttcacgccgtcgttctacgacacgttc
ctgaatgcgctggacggcgacaaggcggcggcccttcccctcagccgggtgatcctgaac
ggcgaggttgtcggcgatgacctgatcatcgcgtcgctggccaagctgccgggcacggcg
ctgtggaacctctacagcatctgcgagacccatgatgtctgcatgtcccatctgacagaa
cccgctggcgatgggcccgcgtcggtgggtgtcccgatggagcatctgcgcgccgtcatt
ctggatcaggccgacgccccatgcccgcccggcacctcgggccagctgcatttcgagggg
ccaaggatgctggggcccggctacgtcaaccggcccgaggaaacccgcctgcggtttcgc
gaggtgacgcttcaggggcgtgagacgcgcctttacgacaccggcgatcaggcgtgggtg
gatgccaccggtgcgctgcatatcgaggggcgcatcgcccatatgctgaagctgcgcggg
ttctcggtccagacgcgggagctgacggacacgatgcgcgaccggctggcgttttccagc
gccgcgccctgggtggcagaggtcggcgcgcgcggtcaaagcctgatcttctacttcgcc
gctgacgccgcacaggcaaggcgcaatgcggaacaatggggcctgaaggcgggaaccaac
aagatgccagcggcccttgccgccgatctgcgcgccgtgttgccggcctattgcgtgccg
tcgttcctcgtgcagatggacgcgctgcccctgcatcccgtgtcgggcaaggcggatctg
cgcgcgctgcctgcggttgaggaggacgaccacggatcagacttcgctgaggatgccgtg
attgccgccgccgccctcgccatgtcctgtgcgccgtcgcagatcgacccggcgctgagt
ttccacgatcagggtggcgattcactgatgtgcgtgaccctgatgctggagctggagaag
acctacggcctgcccatcgacttcgatctggcgatgaatgtgccgctgcaccggctcgac
cagttgatgacgcaggaggccgacgcccccgccccggcggaagacttcggccgcccgggc
atccttttgaccggcgcgacggggtttctgggtggccatgttctggcaaaagcggcacgc
gatctgccggagggagaggtcgtttattgccttgtcagagacaagaaccggggggccagg
gaccggctggatgaggcggcgcagtcccatggggtcgcccctgatcgctacgtgatcgtc
catggcaccctggatgcgccccgcttcgctttggaggccgatgcctatgccgcgttgagc
ggttcggtcagccgcgtcatccactgcgcggcgatggtgaacctcgccatcgggcggcag
gagatgctggattggtcggcgcgcgggatggacaccgtcctgaccttctgcgccgatgcc
cgggccgacctgcgcttcacctcctcaagcgcggtcttcccggaccggggcgggccgtgg
cccgaagctcccgcgaccccgtgggacggctgcaccggctatggcgcggccaagatcgcg
gcggaggcggcaattcgcgccgccgacatcccggcggccatcgtgcgcctgccgtcgctc
tatgatctggacgcgcccaacccgcgcgacatctatgagatcatcctcaaggcgtccctg
cgcgcgggccacatgccgcaggcgcttgaatttccgatgaccgatgtgaccgccgccgcc
gccttcctgctcggcccgatcacggccccggacgccccgatctacaacctgatggccgat
gcgcgcatcgcgccggacgacccaaacgcgctgcccgcgacggactggctggccagggtc
acactggaccccggcatcgccaaggtcatcgccgacttccccgacaccctttgcgcctct
tccgactttgagaacacagccgcccgtgctgcttgggaacgggtcagcgcccttccattc
aacgaaatcagtgacagcgaagccctgctaacgcgccgcgcccgcgactaccaaagcgat
cccgcgttgacctga
DBGET
integrated database retrieval system
