Jannaschia sp. CCS1: Jann_2809
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Entry
Jann_2809 CDS
T00330
Name
(GenBank) deoxyribodipyrimidine photo-lyase family protein (cryptochrome)
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jan03400
]
Jann_2809
Enzymes [BR:
jan01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Jann_2809
DNA repair and recombination proteins [BR:
jan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Jann_2809
Prokaryotic type
Jann_2809
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ABD55726
UniProt:
Q28NI6
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All DBs
Position
2823462..2824673
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AA seq
403 aa
AA seq
DB search
MNASHPPTRAAGLERLARFVPAAGRDYAAKRNYDLPGQGHPHVSQLSPYLRHRLVTEEEV
LEAVLERYSLANAEKFVAEVCWRTYWKGWLELRPSAWAEYRRDLDHIDRTGVAKAEAGQT
DIDAFNAWTRELVETGYLHNHARMWFASIWIFTLGLPWQAGADFFMRHLLDGDPASNTLS
WRWVAGLQTHGKHYVARSSNISKYTDGRHNPEWRLNTQAEPLSGPPHPVPRAAPVSDEVQ
PGLATAILLHDDDLAPDALTDHLSDNIVGLAGLLSVQRRSPQGVSPLVAGFALGALDDAV
ARWGQRFGQPGPIMDDGRHLVDWAKSNGIEQIVTPYAPTGPTSSALRRLRPQLDEHGIDL
VQIVRAWDRAAWSHATHGFFRFKKHIPDLLSHLTLDRDRLENI
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcatcacatccccccacccgcgcggccggactggaacggctcgcccgctttgta
cccgctgccgggcgcgattatgccgccaaacgcaactacgacttgccgggccaggggcat
ccacacgtctcgcaactctccccctacttgcgccaccggctggtcactgaagaagaagtt
ctagaggccgttctggagcgctattcccttgccaacgctgagaaatttgtggctgaggtc
tgctggcgaacctattggaagggctggctggaactgcgaccttcggcctgggcggagtat
cggcgcgaccttgatcacatcgaccggacaggcgtcgccaaggcggaggcgggtcagact
gacatcgacgccttcaacgcatggacccgggaattggtcgagaccggctatttgcacaat
cacgcccgcatgtggttcgcctccatctggatctttacgcttggtttaccctggcaggcg
ggcgcggatttcttcatgcgtcatctgctggatggggatccggcctccaacacacttagc
tggcgctgggtcgcggggctgcaaacccatggaaagcactatgttgcccgctcatcgaac
atctcgaaatacacggatgggcgtcacaatcctgaatggcgtttgaacacgcaggctgaa
cctctctccggcccgcctcatcccgtgccacgcgcggcgcctgtttcggacgaggtgcaa
ccgggtctggcgaccgctattttgctgcatgacgacgatctcgcacctgatgccctgacc
gaccatctatctgataacattgtcggtttggcgggccttctgtccgttcaaagacgatct
ccgcagggggtaagtcctttggtggcagggttcgcgctcggtgcgctggacgatgcggtg
gcgcgatggggtcagcgctttgggcagcccggaccaatcatggacgacgggcgtcatctg
gtcgactgggccaaatccaacggtatcgagcagatcgtcacgccctatgccccgaccggg
cccacctcaagcgcgctgcggcggctgagaccccagttggacgagcatggaatagatctc
gttcaaatcgtccgcgcctgggatcgggccgcctggtcccatgccacacacggtttcttc
cggttcaaaaagcacatcccggacctcttatcccatctgacactcgatagggataggttg
gaaaacatctag
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