Jannaschia sp. CCS1: Jann_2941
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Entry
Jann_2941 CDS
T00330
Name
(GenBank) TRAP C4-dicarboxylate transport system permease DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
jan
Jannaschia sp. CCS1
Pathway
jan02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Jann_2941
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jan02000
]
Jann_2941
Transporters [BR:
jan02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Jann_2941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Podoplanin
Motif
Other DBs
NCBI-ProteinID:
ABD55858
UniProt:
Q28N54
LinkDB
All DBs
Position
complement(2963700..2965016)
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AA seq
438 aa
AA seq
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MGGDIVLWMLGLLILLILLGTHIGVALAVCSGLGVFLMLGSFEAAVSILGNTAYEAIRKD
VFVVIPLFVLMGDFISRSGAAGDLYRICDRTLKRLPGRLAIATIAGNTVFAAVTGVSIAA
AAAFSRIAYPEMKKAGYKQTFALGAVAGSACLGMLIPPSVLLIVWAILTELSVGALFIAG
IIPGILLAVMFAGYVVISVMHKPEIAPAFTADLVEPTRQEIRSELIGGLGILGLIMLVIG
GIWQGFFTPTEAAGFGAIGAFIIGLIKGMRGKEILDAIYQAGRTTAPIMFLLISAQMYSR
LLAIGGAVPFIQGIFFSIGAEPWMIIAMMMVIWIILGMLVDSVSIILLTVPIFAPMAVIL
GIDPIAFAIFGILVIEAGLLTPPFGLLVYTVKGAVPDPTVTLGQIFWGSTPYFLLILLAA
LIVLFIPSLATWLPDIMF
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgggtggggatatcgtcctttggatgctgggtctgttgatcctgttgattttgctcggc
acccatatcggcgtggcccttgcggtctgctcgggtctcggcgttttcctgatgttgggc
agctttgaggccgcggtctcgatcctgggcaacaccgcttatgaggcgatccggaaggac
gtcttcgtggtgatccccctctttgtcctgatgggggatttcatatcaaggtcgggggcg
gcgggggacctttaccggatttgtgaccgcacgctgaagcgcctgccgggccgtctggcc
atcgcgacgatagcgggcaacaccgtctttgccgccgtcaccggcgtttccattgccgcc
gccgccgcgttttcccgcatcgcatatcccgagatgaagaaggcaggctacaagcaaacc
ttcgcgctcggcgcggtcgctgggtccgcgtgccttgggatgctgatcccgccctcggtc
ctgctcattgtttgggcgatcctgacggaactcagcgtcggcgcgctcttcattgcgggt
atcatccccggcatccttctggccgtcatgttcgcggggtatgtcgtcatctccgtcatg
cacaagcccgagatcgcgcctgccttcaccgctgatctggtggagccgacgcggcaggaa
atccgctctgaactgatcggagggctcggtattctcggcctcatcatgctggtcatcggc
ggtatctggcagggcttcttcacgcccacggaagccgccgggttcggggccatcggcgcg
tttatcatcggcctgatcaaggggatgcgtggcaaggaaatcctcgacgcgatctatcag
gcgggccgcaccaccgcgccgatcatgttcctgctgatctcggcccagatgtattcgcgg
ctcttggccatcggcggggcggtgccgttcattcagggcatcttcttctccatcggggca
gagccgtggatgatcatcgcgatgatgatggtgatctggatcatcctcgggatgctggtg
gactcggtgtcgatcatcctgctgaccgtgccgatcttcgcgcccatggccgtgatcctt
ggcattgaccccatcgcgtttgccatcttcggcattctggtgatcgaggccgggctgctg
acgcccccgttcggcttgctggtctacaccgtgaagggggctgtgcccgatcccaccgtc
acgttgggacagatcttctggggctccacgccctacttcctgctgatccttctggcggcg
ctgatcgtgctgttcatcccgtcgctggcaacgtggttgccggacatcatgttctag
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