Jannaschia sp. CCS1: Jann_3247
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Entry
Jann_3247 CDS
T00330
Name
(GenBank) TRAP dicarboxylate transporter DctQ subunit
KO
K11689
TRAP-type transport system small permease protein
Organism
jan
Jannaschia sp. CCS1
Pathway
jan02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Jann_3247
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jan02000
]
Jann_3247
Transporters [BR:
jan02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Jann_3247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctQ
Motif
Other DBs
NCBI-ProteinID:
ABD56164
UniProt:
Q28M98
LinkDB
All DBs
Position
complement(3297306..3297830)
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AA seq
174 aa
AA seq
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MPVLRWLERHFEEALCCIALVIIACSVFTQVMARYVFDIPLHWTEEVAAISMVWAVYMGA
SLCVRERFHIRILVAVHSLPTGMGKVTIIIADICWAAFSIIMIRVSWQYLTVLWLYPSRS
PSLGINEFYPQSILVIGYGLMLARLLQTYILWIRDGAEGLPGMLVEDGDAEQHV
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcctcagatggctagagcggcattttgaagaggcgctgtgctgcatcgccctc
gtcatcattgcatgcagcgtcttcacccaggtcatggcgcgctacgtcttcgacatcccc
ttacattggactgaggaagtcgccgcgatttcaatggtatgggcggtttatatgggggcg
tcgctctgcgtgcgcgaacgctttcacatccgtatcctggtggcggtccactcgctcccc
acggggatgggcaaggttacaatcatcatcgcagatatctgttgggccgcgttttcgatc
atcatgatccgcgtcagctggcagtatctgaccgtcctgtggctgtacccgtcccgatcc
ccgagccttgggatcaatgagttctatccccaaagcatcctcgttatcggctacggcctg
atgcttgcgcgcctcctgcaaacctacatcctctggatccgtgatggggccgagggcttg
ccgggcatgttggtggaagacggcgacgcggagcaacacgtatga
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