Jannaschia sp. CCS1: Jann_3462
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Entry
Jann_3462 CDS
T00330
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jan03016
]
Jann_3462
Enzymes [BR:
jan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Jann_3462
Transfer RNA biogenesis [BR:
jan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Jann_3462
Prokaryotic type
Jann_3462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABD56379
UniProt:
Q28LN3
LinkDB
All DBs
Position
complement(3512238..3513023)
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AA seq
261 aa
AA seq
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MPRYAFRIEYDGHPFKGWQRQTDLPSVQGAVEAALAKLEADVPTIAAAGRTDTGVHALGQ
VAHADMQRDWDPFRLAEALNYHLKPAPVAITACARAHDDFHARFSATWRSYTYRMICRRA
PLVHARGHAWAVRGTLDVTAMAEGARHLIGKHDFTTFRATHCQALSPIKTMDEIRVEEVS
LPAGTEIRFHLKAQSFLHNQVRSIVGSLEHVGSGAWAPDDMRRALEACDRAECGTVAPPD
GLYMTGVGYDEDPFADGWKDT
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctatgctttcaggatcgaatatgatggccacccgttcaaagggtggcaacgc
cagacggatctgccgtctgttcaaggggcggtggaggcggcgctggccaagctggaggcc
gatgtgccaaccatcgccgccgcagggcgcaccgacacgggcgttcacgctttggggcag
gtggcccatgccgacatgcagcgcgattgggatccctttcgattggcggaggcgttgaac
taccacctcaaacccgcgccggtggcgatcacggcctgcgcgcgggcgcatgacgacttc
cacgcccggttttccgccacatggcggagctacacctaccgcatgatctgtcgccgtgcg
ccgttggtgcatgcgcgtggacatgcctgggccgtgcgcggcacgcttgatgtgactgcg
atggcggagggggcgagacatctgatcggcaagcacgatttcaccaccttccgcgcgacc
cattgtcaggcgctgtcgcccatcaagacgatggacgagatccgcgtggaagaggtgtcc
ttgcctgcgggcaccgaaatccgctttcacctcaaggcgcagtcctttctgcacaatcaa
gtccgttccatcgtgggttccctggaacatgtcggctccggcgcttgggcgcccgatgac
atgcgccgcgcattggaggcgtgtgaccgggcggaatgcggcaccgtcgccccgccggac
gggctttacatgaccggcgtgggatacgacgaagaccccttcgcggacgggtggaaagac
acataa
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