Jannaschia sp. CCS1: Jann_3602
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Entry
Jann_3602 CDS
T00330
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
jan
Jannaschia sp. CCS1
Pathway
jan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Jann_3602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jan03400
]
Jann_3602
DNA repair and recombination proteins [BR:
jan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Jann_3602
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Jann_3602
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
DUF87
Kinesin
TrwB_AAD_bind
UB2H
AAA_16
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
ABD56519
LinkDB
All DBs
Position
3678087..3680282
Genome browser
AA seq
731 aa
AA seq
DB search
MHNNSPEQMPDTGRAVDALRAQLKMEGGKAFVLQTEFEPAGDQPTAIAELSEGIREGERD
QVLLGATGTGKTFTMAKMIEETQRPAIILAPNKTLAAQLYAEFKNFFPENAVEYFVSYYD
YYQPEAYVARSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETY
GAMTQDLHAGREYDQRKVIADLVAQQYRRNDAAFQRGCFRVRGDSLEVWPAHLDDRAWKL
SFFGEELESITEFDPLTGQKTDTFEKIRVYANSHYVTPRPTMQQAMKGIKSELAMRLKQM
IDEGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEYIPDNAI
VFADESHVSVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSA
TPAAWELEQAGGVFTEQVIRPTGLIDPQIEIRPVDMQVDDLLDEVRKVAADGYRTLVTTL
TKRMAEDLTEYMHEQGIRVRYMHSDIDTLERIEILRDLRLGAFDVLIGINLLREGLDIPE
CGLVAILDADKEGFLRSETSLIQTIGRAARNADGRVIMYADKITGSMERAMRETERRRVK
QLAYNEEHGITPATIKKNVDDILMGVYQGDTDQSRVTAKVDKPLVGANLAAHLDGLRDKM
RKAAENLEFEEAARLRDEVKRLETVELAIADDPLARQSAVEAAVEDASKASGRSTAGRGG
QRGGNVKRRKR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacaattcgcccgaacagatgcctgacacgggccgcgccgtggacgcgctgcgc
gcacaattgaaaatggagggtggcaaagcctttgtcctccagaccgagtttgaaccggca
ggcgatcagcccaccgcaatcgcagaattgtccgaggggattcgcgagggtgaacgggac
caggtgctccttggcgcaacgggaactggtaagaccttcaccatggcaaagatgattgag
gaaacgcagcgccccgccatcattcttgcgcccaacaagacgttggccgcgcagctttat
gcggagttcaagaacttcttcccggaaaacgccgtcgaatacttcgtcagctactacgac
tattatcagcccgaggcctatgtggcgcggtccgacacctacatcgagaaagaaagccag
atcaacgaacagatcgaccgcatgcgccactcggccacgcgggccctgttggaacgggac
gacgttatcatcgtggcatccgtgtcgtgtatctacggcatcggcagcgtggaaacctac
ggtgcgatgacccaggatctgcacgcaggccgggaatatgaccaacgcaaggtcatcgcc
gatctggtggcgcagcaatatcgccgcaacgacgccgcctttcagcgggggtgtttccgc
gtgcgcggtgacagtctggaagtctggcccgcccacttggatgatcgcgcctggaagctg
tcgttttttggggaagagctggaaagcatcaccgaattcgaccccctgaccggtcagaag
acggacacgttcgagaagatccgcgtctacgcgaattcccactacgtcacgccgcgcccc
acgatgcagcaggccatgaagggcattaagtctgagctggcgatgcgcctgaaacagatg
attgacgagggcaagctgctggaggcccagcggctggaacaacgcaccaacttcgatctg
gagatgctggaagccaccggcgtctgcaacgggatcgagaactactcccgctatctgacg
ggccgcgcgccgggtgaaccgccccccaccctgttcgaatacatccccgataatgcgatt
gttttcgccgacgaaagccatgtttccgtgccgcagatcggcgggatgtaccgcggcgac
taccggcgcaaattcacgctggcagaacacggcttccgcctgccctcctgcatggacaac
cgccccctgaagtttgaggaatgggacgccatgcggccgcaatccgtcttcgtatccgcc
acacccgccgcgtgggagttggagcaggcgggcggcgttttcaccgaacaggtcattcgc
ccaacaggcctgatcgacccgcagatcgagatccgaccggtggatatgcaggtcgatgat
ctgctggatgaggtccgcaaagtggccgccgatggttatcgcacgctggtcacgacgctc
accaagcgcatggccgaagatctgacggaatacatgcacgaacagggcatccgcgtgcgc
tacatgcactcggatatcgacacactggaacggatcgaaatcctgcgcgacctgcggttg
ggcgcgtttgacgtgctgatcgggatcaacctgctgcgcgagggtctcgacattccggaa
tgcgggttggtggccattctggatgccgacaaggaaggctttttgcggtccgagacgtcc
ctgattcagaccattgggcgggccgcgcgcaacgccgacggtcgcgtgatcatgtatgcg
gacaagatcaccggctccatggagcgcgccatgcgcgagaccgagcggagacgggtcaag
cagttggcgtataacgaagaacacggcatcacgcccgcaacgatcaagaagaatgtcgat
gacatcctgatgggcgtctaccagggtgacaccgaccaaagccgcgtcacggccaaggtc
gacaaaccgcttgtgggcgcgaaccttgcggcgcatctcgacggcctgcgcgacaagatg
cgcaaggcggcggagaacctggagtttgaggaagctgcgcgcctgcgtgatgaggtcaag
cggttggagacggtggaactggccatcgccgacgacccgctggcccgccagtcagcggtg
gaggcggcggtggaagatgcgtcaaaggccagcggccggtcaacggcaggtcggggcggt
caacggggtgggaacgtcaagcggcggaagcggtag
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