Jannaschia sp. CCS1: Jann_3677
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Entry
Jann_3677 CDS
T00330
Name
(GenBank) TRAP dicarboxylate transporter DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
jan
Jannaschia sp. CCS1
Pathway
jan02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Jann_3677
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jan02000
]
Jann_3677
Transporters [BR:
jan02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Jann_3677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DcuC
Motif
Other DBs
NCBI-ProteinID:
ABD56594
UniProt:
Q28L18
LinkDB
All DBs
Position
complement(3753884..3755263)
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AA seq
459 aa
AA seq
DB search
MTDGTLITLISLGVTFLFMLGVPVFLVIGYWVIGMSFVLGLPLDNIAAALSRVFTDGFAL
LAMPLFILTGDLINRSGIARRLTDYAYACLGWIRGGLAMAALGACGLFAAISGSNSATTA
TIGSMLHPEMVKGGYDERFSAATAAAGGTVGIIIPPSIIFIVYGFLMNLPISDLFVAGII
PGSLMVLAMMTACFLVCFKNKWGYIIDLNILRVLKTGIGAWLGFFAIGLVLWGIYTGKFS
PTEAAGVTVGFCVFVGFACLAITKLISISNPSFATREERPVDERSFGGMLVVNGFGPLEL
PSITMRSAQITGILAPLIAVSVVMQQILSVLGAQAFLTDFVTSMGGYYAVLFTAMAIVFV
CGMVLESLPVTIILAPILAPIAHDIGVEPVQFAVIFLVGASIGFITPPYGLNLYVASGVT
GVPYFKLLRYTWPYLIALISIWIIVALVPSLSTMLLPDL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgggacactcattaccctgatctctctgggcgtgaccttcctgttcatgttg
ggggtcccggtgtttctggtgatcggctactgggttatcggcatgtcgttcgtgttgggc
cttccgctcgacaatatcgcggctgccctgtcccgcgtcttcaccgacggcttcgcgctt
ctggccatgccgctgttcatcctgactggcgacctgatcaaccgatccggcatcgcgagg
cgtctgaccgactacgcctatgcctgcctgggctggatacggggcggcctcgccatggca
gcgcttggggcttgcggtctctttgcggccatctcgggctccaactccgccaccacggcc
accatcggctctatgctgcacccggaaatggtgaagggcgggtatgatgaacgcttctcg
gccgcgacggcggcggcgggcggtacggtcgggatcatcatcccgccgtcgatcatcttc
atcgtctatggcttcctgatgaacctgccgatctcagacctcttcgtggcgggcatcatt
cccggctcgctcatggttctggcgatgatgacggcctgtttcctggtctgtttcaaaaac
aagtggggctacatcatcgacctcaacatcctgcgggtcttgaagaccggtatcggcgca
tggctgggcttctttgcaatcggcctcgtgctttggggcatctacaccggcaaattctct
cccacggaagcggcgggcgtgacggtgggcttctgcgttttcgtgggctttgcgtgcctc
gcgatcacgaagctcatcagcatctccaacccgagctttgccacccgtgaagagcgcccg
gtggacgagcgcagcttcggcggcatgctggtcgtcaacggtttcggcccgctggaattg
ccgtcgattaccatgcgctcggcccagatcaccggcatcctggcgccgctgatcgcggtg
tccgtggtgatgcagcagatcctgtcggttctgggggcgcaggcgttcctgaccgatttc
gtgacctccatgggtggctactacgctgtcctcttcaccgcaatggcgatcgtcttcgtg
tgcggcatggtgctggagtcgcttccggtgacgatcatccttgcgcccattctggcgccc
atcgcccatgacatcggggtggaacccgtgcagtttgcggtgatcttccttgtgggcgcg
tccatcggcttcatcacgccgccttacggtttgaacctctacgtggcctccggtgtgaca
ggggtgccgtacttcaaattgttgcggtatacttggccctacctgatcgcgttgatctcg
atctggatcatcgtggcgcttgtgccgtcgctgtcgacgatgctactgcccgacctctaa
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