Jannaschia sp. CCS1: Jann_3778
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Entry
Jann_3778 CDS
T00330
Symbol
smoM
Name
(GenBank) TRAP dicarboxylate transporter DctP subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
jan
Jannaschia sp. CCS1
Pathway
jan02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Jann_3778 (smoM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jan02000
]
Jann_3778 (smoM)
Transporters [BR:
jan02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Jann_3778 (smoM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
ABD56695
LinkDB
All DBs
Position
complement(3862587..3863624)
Genome browser
AA seq
345 aa
AA seq
DB search
MKGRNFMNKILTAASVAAFAASGAMAETYNLQSAFGALPVLHPAAERFVSNVSTLTAGEV
DFNYLLAGEMSPPFEIFDNVSAGAIDAGWSFAAYASGREPAAALFGSVPFGGDPLSYISW
LHHGGGLELWREIYEPYNLVPMACGVILSEAGGWYTSEINAPEDLQGLNIRIGGLGGEIL
ARLGANAMSLPAGEISTALETGRLDATELSFPLVDALLGFDEVAQNYYFPGWHQPAGFIE
FYMNKDRWDALTDQQRTAIEVSCADANLYALGVAAGAQSAVLDDFRANGVNVQRFPDSVM
EALRTAADEVYAENAAEDEMFARVIESYRAYADSYEEYRALSDLN
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggaggaacttcatgaacaagatactgaccgccgcctcagtcgcggcattcgca
gcctcgggcgcgatggctgaaacatacaaccttcaaagcgcgttcggggcgttgcccgtc
ttgcaccctgccgccgaacggttcgtgtccaatgtctccacgctgaccgcgggggaggtg
gacttcaactatctgctggccggtgaaatgtcgccgccgtttgagattttcgacaatgtc
agtgcgggcgccattgatgcgggctggtctttcgcggcctatgcatcgggccgagagcct
gcggcggcgctgtttggctcggttccgtttggcggtgacccgctgtcctacatcagctgg
ctgcaccatggcggcgggttggaattgtggcgcgagatctacgagccctacaatctggtg
cctatggcctgcggcgtcatcctgtccgaggcgggcggctggtacacgtctgagatcaat
gcgccggaggatttgcagggtctcaacatccggatcggtggccttggcggcgagattctc
gcgcggcttggggccaacgccatgtccctgcccgccggagagatttcaaccgcgctggag
accggtcgtctggatgcgacagagctctcgttcccgctggtcgatgcgcttctgggcttc
gatgaggtggcgcagaactactatttccccggctggcaccagcctgcgggctttatcgag
ttctatatgaacaaggaccgttgggacgccctgacagatcagcagcgcacagcaatcgaa
gtctcctgcgccgacgcaaacctttacgccttgggggttgcggccggcgcgcaaagcgcc
gtgttggacgatttccgcgccaacggtgtcaacgtccagcgctttcccgacagcgtgatg
gaggcgttgcgcacggctgccgatgaagtctacgccgagaatgccgcagaggatgaaatg
tttgcccgcgtcatcgaaagctaccgcgcctatgcggacagctatgaggaataccgcgcg
ctatctgatctgaactga
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