Jannaschia sp. CCS1: Jann_3779
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Entry
Jann_3779 CDS
T00330
Symbol
gtrB
Name
(GenBank) TRAP dicarboxylate transporter DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
jan
Jannaschia sp. CCS1
Pathway
jan02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Jann_3779 (gtrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jan02000
]
Jann_3779 (gtrB)
Transporters [BR:
jan02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Jann_3779 (gtrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ABD56696
UniProt:
Q28KR6
LinkDB
All DBs
Position
complement(3863621..3864904)
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AA seq
427 aa
AA seq
DB search
MAALTLTGILAGYRIGMVLAGAAALFILISDLPVAYFNLLVSRIYANVLSNWLLVAIPMF
ILMGLILEISGVAERSLRAAQRALGGSAAGMGISVLVIGVLLAASSGIVGASVVLLALLA
LPRLEEAGYDKPTSAGLVASSGTLAILIPPSVMLIVLGDQLQTPVPAMFAGAIWPGLILV
GCYGLYILWRARKLPPMTNVDRVPPWRLLVDLGPLLALVISVLGSIISGLATPTEASGLG
AFGAVLITLIYGRFSVAMLMEAARKTVITTAIVLFVMIGATCFSAVFKGVGGDDLVEAGI
MAFGSDPYTVLAVVMAAIFILGFVLDWLEITLILIPIFAPIVAGLDFGNGLAGRDLLVWF
GILVAVNLQTSFLTPPFGFSLFYLRGAAGDRLTTPQIYRGVAPFIALQVAVLVALILFPG
LITGFSP
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgacgctgacgggcatcctggcgggctaccgtattggcatggtgttggcg
ggcgctgcggcgctgttcatcctgatctcggatctgccggtcgcctatttcaacctgctg
gtcagtcgtatctacgccaacgtgctgtccaactggctcttggtggcgatcccgatgttc
atcctgatggggctgattttggagatttcgggggttgccgaaagatcgctgcgtgcggcc
caacgggcacttggcggcagtgcagcgggcatggggatttcagttctggtgatcggcgtg
cttctggcggcgtcgtccggcattgtgggggcaagtgtcgtgttgctggcccttctggcg
ctgccccgattggaggaggcgggctatgacaaacccacatcggcgggtctggtggcgtct
tcggggacactggcgatcttgatcccgccatcggtcatgctgatcgtgctgggcgatcag
ttgcagacccccgtgcccgcgatgtttgcaggcgcgatctggcccgggctcatcctcgtg
ggttgttacggcctctacatcctgtggcgcgcgcgcaaattgccacccatgaccaatgtt
gatcgtgtgcccccatggcggcttctggtggatcttggcccgcttctggccttggtcatc
tctgtacttggatccatcataagcggcctcgccacgcccacggaggccagtggccttggc
gcattcggcgcggtcctgatcacattgatctatggcaggttcagcgtcgccatgctgatg
gaggccgcaagaaaaaccgtcataaccaccgccattgtgctgttcgtaatgatcggggcc
acgtgcttttcagccgtcttcaagggcgttggtggcgatgatctggttgaggccgggatc
atggcgttcggctcagacccctatacggtgctggccgtggtcatggcggcgattttcatc
cttggcttcgtgctggattggctggagatcaccctgatcctgatcccgatcttcgccccc
atcgtggcagggctggatttcggcaacgggctggccgggcgggacctgctggtctggttc
ggcatcctggtggcggtgaaccttcagacctctttcctgacgccgcccttcggcttttcg
ctgttctacctgcgtggtgcggcaggcgatcgtctgaccactccgcagatctacaggggg
gtggcccccttcatcgcgttgcaagtcgccgtgcttgtggcgctgatcctgtttcccgga
ctgatcaccgggttttcaccatga
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