Jannaschia sp. CCS1: Jann_3788
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Entry
Jann_3788 CDS
T00330
Name
(GenBank) transcriptional regulator, GntR family
KO
K11475
GntR family transcriptional regulator, vanillate catabolism transcriptional regulator
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jan03000
]
Jann_3788
Transcription factors [BR:
jan03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Jann_3788
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_11
MarR_2
Mannitol_dh_C
PaaX
Rrf2
TrmB
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ABD56705
UniProt:
Q28KQ7
LinkDB
All DBs
Position
complement(3872179..3872895)
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AA seq
238 aa
AA seq
DB search
MHSNSQHLQSVVRRQIVSGGREPGSRINEVALAAEFEVSRTPARTALAGLEAEGLIEKRE
GRGYTVCSISRADVSNAIAVRATLEALAAKTMAETGLTPEVEATLLSSIATTEAILESDT
PVKELLDGYHAANVIFHETIMQKCGNDLIAHTFERIAMLPLAKLGSLVFDRGAPQRERMR
LTVGHSQHVILFDAIKQRDGARAEAMMREHSHATLNYADLFLRKTYGIATMRTDEMEV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcattccaactctcaacatctgcaatccgtggttcgccgccagatcgtatccggcggg
cgagagccgggctcccgtatcaacgaggttgcacttgccgcagaattcgaagtctcgcgc
acaccggcccgcaccgcgctggccgggttggaggccgaggggttgatcgaaaagcgcgaa
gggcgcggatataccgtgtgttcgatttccagggcggacgtgtccaacgcgatcgccgtg
cgcgcgacgcttgaggcgctggccgctaagacgatggccgaaaccggcttgacgccggag
gtcgaggcgacgctcttgtcctccatcgcgacgaccgaggcgatcctggagtccgatacc
ccggtcaaggaactgctcgatggctaccacgccgcgaatgtcatctttcatgagaccatc
atgcaaaagtgcggcaatgatctgatcgcccatacgtttgaacgtatcgccatgctgccc
ttggccaaactgggatccctggtgtttgaccggggggcgccacagcgcgaacggatgcga
ctaacggttggccattcgcagcacgtgattttgttcgacgcgatcaagcagcgcgatggg
gcgcgggccgaagccatgatgcgtgaacacagccatgcgacgcttaactacgcggacctt
tttctgcgcaagacctatggcatcgccacgatgcggaccgatgagatggaggtatga
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