Jannaschia sp. CCS1: Jann_3914
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Entry
Jann_3914 CDS
T00330
Name
(GenBank) OmpA/MotB
KO
K03286
OmpA-OmpF porin, OOP family
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jan02000
]
Jann_3914
Transporters [BR:
jan02000
]
Other transporters
Pores ion channels [TC:
1
]
Jann_3914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BON
DUF748
Motif
Other DBs
NCBI-ProteinID:
ABD56831
LinkDB
All DBs
Position
4010986..4012962
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AA seq
658 aa
AA seq
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MIVPSPNKDRISALVGPACFVVAGGLAVATAIVAALAIERRSTEDILTALEADGIQWVDV
SANGLQVFLDGTAPDEALRFRAQTGASAIVDSDRVINRLDVAALGTAAPPRFSLDMLRNG
DGIQLIGLIPGPEGDEAFAVAETIADIAGSADVVNMVEMADLEAPENWDEALAYGLRALA
ALPRSKVTVLANRVEVEAVGETREERAEFIARLQQNQPAGVEIVLDISAPRPVITPFSLR
FVRDDSGARFETCTADTQAAHDQIVAAGQAAGTTGNTPCTIGLGVPSPSWGNAVATSLEA
LTELGNGSVTLSDADVTLIAAQGTSQELFDTVVGELDADLPAVFSLQAILPEPELEAAAA
GPARFTATFDQAQGVRLRGRLPGGAIGQSVQAFAAATFGAGTTDIATREVADLPQGWSIR
VMAGLTALSQLEDGVLTIEPDTLRLSGRTGDSELISALTRQIAEDLGPGAIFDMNVAYDE
ALDPVASQPTPQECEARIRDIQDETKITFDPGSTEINRAAGEVLDEIAEILPDCMHVSME
IGGHTDAQGGETMNLNLSQSRANAVLNGLLARGVLVSNLAAQGYGESQPIADNETEDGRE
QNRRIEFRLLADAEVAGLAADVDDQPRTRAGILAEGAIADWPFELRPLPRPEPPIDDE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgatagttcccagtccgaacaaagaccgcatatccgcattggtcgggcctgcctgcttc
gtggtggcgggcggactggctgtggcgacggccatcgtggccgctctcgcgattgagcgg
cgctccactgaagacatcctgaccgcgctggaagccgacggcattcaatgggtcgatgtt
tcggccaatggccttcaggtgttcttggatggcacagcgccggatgaggcgttgcgcttc
cgcgctcagaccggtgccagcgccattgtggattccgaccgggtgatcaaccgactggat
gtggccgcgcttggcacggcggccccgccgcgcttctccctcgacatgctgcgcaatggc
gatggcatccagctgatcggcctgatccccggccccgaaggcgatgaagccttcgccgtg
gccgagaccatcgctgatattgccggatcggccgacgtcgtgaatatggtggagatggcg
gaccttgaagccccggagaattgggacgaggcgctcgcctacgggttgcgtgcgctggcg
gctctgcctcggtccaaggtgaccgttctggcaaacagggtcgaggttgaagcggttggc
gaaacccgcgaggaacgcgccgaattcatcgcgcgattgcaacagaaccaaccggccggg
gtcgagattgttctcgacatatctgccccccgcccggtgatcacgcccttctctctgcgg
tttgtgcgcgacgacagcggcgcgcggtttgaaacctgtaccgccgacacccaagctgcc
catgaccagatcgtggcggctggccaagctgctggcaccaccggcaacacaccctgcacc
atcggtcttggcgtgccgtccccaagctggggcaacgcggtcgccacatcactggaagcc
ctgacggaactgggcaacggcagtgtgacgctgtctgatgctgatgtgaccctgatcgcc
gcccaaggcacctctcaggagctgttcgatacggttgtgggcgaattggacgcggacttg
cccgccgtcttctcgctccaggcgatcctgccagaaccggagcttgaggccgcagccgcc
ggccccgcgcggttcactgccacctttgaccaagcccagggcgtgcgcctgcgcgggcgg
ctgccgggcggcgcgattggccaatccgtgcaggcctttgccgcggccaccttcggggcg
ggcacgacggacattgcaacgcgtgaagtcgccgatctgccgcaaggctggtcgatccgc
gtcatggcgggcctcacggccttgtcgcaactggaagatggcgtcctgacgattgagccc
gataccctgcgcctgtcgggccgaacgggcgacagcgagttgatctctgcccttacccgc
cagatcgccgaagatctgggcccgggtgccattttcgacatgaatgtggcctatgatgag
gcgctggatcccgtcgcatcccaacccacccctcaggaatgtgaagcgcgcattcgcgac
atccaggacgagacgaagattaccttcgaccccggctcgaccgagatcaaccgcgcggcc
ggcgaggtgctggacgagatcgccgagattttgcccgattgcatgcatgtgagcatggag
atcggggggcataccgatgcccagggcggggagaccatgaacctcaacctcagccagtcc
cgcgccaatgcggtcctgaacggccttctggcccgcggcgtgctggtcagcaaccttgcc
gcccaaggctatggcgaaagccagcccattgccgacaacgagacggaagacgggcgcgaa
cagaaccgtcgcatcgagttccgcctgcttgccgacgccgaagtcgcgggtctggccgcc
gacgtcgatgaccagccacgcacccgcgcaggcattctggcggagggcgcaattgccgat
tggccgtttgagctgcggccccttccccgcccggagccgcccatcgatgacgagtaa
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