Jannaschia sp. CCS1: Jann_4093
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Entry
Jann_4093 CDS
T00330
Name
(GenBank) ABC transporter related protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
jan02000
]
Jann_4093
Transporters [BR:
jan02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Jann_4093
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_22
AAA_16
DUF87
G-alpha
AAA_30
AAA_29
TsaE
MobB
OST_P2
AAA_24
Motif
Other DBs
NCBI-ProteinID:
ABD57010
LinkDB
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Position
4199587..4201344
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AA seq
585 aa
AA seq
DB search
MSRKPTRGAFARVLSFAGSRWARRPGRLSVILVLQVVSTGADVSIPILTGRLVASVAENG
APWAAFYGLLALGVLSIVTKIASYFAIIDLTIPTMQEVEAEAFARVQRLPASWHANAFAG
STVRKITRGAWALDDMGDLLMLALGPSVLVLIGTIATLTAFRVEVGLVALLGAAFFVTVS
LVLTLKWVAPAARLANAQDSRVSGALADAITSNAVVKAHAAEAREDARLERVLDKWAHRS
RRTWRRGTWSGLVQDMCLWVLRALVLGGALLAFMRGAAGAGEIAFTVSALGMLDGYLRQI
GNHVRNLQKAVNDAEEMVELMEDAAETDVVRPPARSLPPRAAALSFDHVGYGYDGAQTPL
FTDLHVVIPAGQKVGLVGRSGSGKTTFVKLIQRLHEVTGGAITLNGVDIASVPLADLRAN
VALVPQEPILFHRSLGENIAYANPEATIQDVRAAAGKAGAAEFIDRLEKGYGTEVGERGV
KLSGGERQRVAIARAFLSDAPVLVMDEATSSLDSEAEARVAEAAERLMEGRTTLVIAHRL
ATVERMDRILVFDRGRIVEDGTPTELLARRNGLYRSLREKQTLVA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaaaaccgacccgcggtgccttcgcccgcgtcctttcctttgccgggtccaga
tgggctcgtcggcccggccgacttagcgtaatcttggtccttcaggtcgtctcgacgggc
gccgatgtctcaatcccgatcctgaccggacggcttgtcgcttcggtggctgagaacggc
gcgccgtgggcggcgttctacggtcttcttgcccttggcgtgctgtccattgtgaccaaa
atcgcgagctacttcgcgatcatcgatctgacaatcccgaccatgcaggaggtggaggcc
gaagccttcgcccgtgttcagcgcctgccagcgtcttggcacgccaacgccttcgcgggc
tcaaccgtgcgtaagatcacgcggggggcctgggcgcttgatgacatgggcgaccttctg
atgctggcgcttgggccttcggtgcttgtgctgattggtacaatcgcgacgctcactgcc
tttcgggtagaggtcgggttagtcgcgctgctgggagcggctttcttcgtgacggtctct
cttgtccttacgctcaaatgggtcgctccggcggcgcgattggcaaacgcgcaagacagc
cgtgtctcaggtgccctggcagatgcgatcacgtcaaatgccgtcgtgaaagcccatgcc
gcagaggcgcgtgaagacgctcggctcgaacgggtgctggacaagtgggcacatcggagc
aggcggacatggcggcggggaacgtggtcgggcctcgtacaggatatgtgcctctgggtc
ctgcgggcgcttgtgcttggcggcgcacttctggccttcatgcgcggcgcggccggtgcg
ggagagatcgctttcacggtctctgccctcggcatgctcgacggatatctgcgccagatc
ggcaaccacgttcgcaacctccagaaggcggtcaacgacgccgaagagatggtggaattg
atggaggacgccgccgagacggacgtggtccgccccccggcgcgcagcctgccgccccgc
gccgcagcactttctttcgaccacgtgggatacggatacgacggcgcacagacgccgctt
ttcactgatctgcatgttgtcatcccagcgggccaaaaggtcggtctcgttgggcgttcg
gggtctggcaagaccacatttgtcaagctcatccagcgcctgcatgaggtaaccggcggg
gcgatcacgctgaatggcgtcgacatcgcgtcggtcccgttggccgacttgcgggccaac
gtcgcgttagtcccgcaagagccgatcctgttccaccgctccctgggcgagaacattgcc
tatgccaatccggaggcgaccatccaggacgtgcgcgccgcagcaggcaaggcgggcgcg
gcggagttcatcgaccggttggaaaaaggatacggcaccgaggtgggagagcgcggtgtc
aagctttccggcggtgagcgtcaacgggtcgcgatcgcacgggccttcctgtcggacgcg
cccgttctggtcatggatgaagcgacctcttcgctcgatagcgaggcggaggcgcgtgtg
gcagaggcggctgagcggctcatggaggggcgcacaacgcttgtgatcgcgcatcggttg
gcgacggtcgaacggatggaccggatcctggtctttgatcgggggcgtattgtcgaggac
ggcacgcccaccgagttgttggcgcggcggaatgggctgtatcggtcgctgagggagaag
cagacattggtggcgtaa
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