Jannaschia sp. CCS1: Jann_4229
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Entry
Jann_4229 CDS
T00330
Symbol
hvrA
Name
(GenBank) Trans-acting regulatory protein HvrA
KO
K03746
DNA-binding protein H-NS
Organism
jan
Jannaschia sp. CCS1
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
jan03036
]
Jann_4229 (hvrA)
03400 DNA repair and recombination proteins [BR:
jan03400
]
Jann_4229 (hvrA)
Chromosome and associated proteins [BR:
jan03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
Jann_4229 (hvrA)
DNA repair and recombination proteins [BR:
jan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Jann_4229 (hvrA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS
LIAS_N
K-box
MtxA_C
Histone_HNS_N
hnRNP_Q_AcD
Motif
Other DBs
NCBI-ProteinID:
ABD57145
UniProt:
Q28JG7
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All DBs
Position
plasmid1:14819..15145
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AA seq
108 aa
AA seq
DB search
MKAGPMAKTDLEKLSVEELKKLQKDTAKAIASFEDRKRAKAIAELEAVAQKHGFKLADLV
GGKKAKVASPAKYKHPENPSLTWTGRGRQPNWIKDGLAAGKSLEDFAI
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctggacccatggcaaaaacagatcttgaaaaactatccgttgaagagctgaag
aagctgcaaaaagatacggcgaaggcgattgcgagttttgaagaccgcaagcgtgctaag
gcgatcgcagaattagaggccgtggcacagaaacatggattcaagctggcggatcttgtg
ggtggcaagaaggccaaagttgcttcgcctgccaagtacaagcatccggagaacccatcg
ctcacttggaccggtcgtggtcggcagccgaactggattaaggatgggcttgccgcaggg
aagtcattggaagatttcgcgatttag
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