Jeotgalibaca arthritidis: G7057_04890
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Entry
G7057_04890 CDS
T06477
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
jar
Jeotgalibaca arthritidis
Pathway
jar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G7057_04890 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jar03021
]
G7057_04890 (rpoC)
03400 DNA repair and recombination proteins [BR:
jar03400
]
G7057_04890 (rpoC)
Enzymes [BR:
jar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G7057_04890 (rpoC)
Transcription machinery [BR:
jar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G7057_04890 (rpoC)
DNA repair and recombination proteins [BR:
jar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G7057_04890 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QII81872
UniProt:
A0A6G7K9G1
LinkDB
All DBs
Position
complement(973567..977223)
Genome browser
AA seq
1218 aa
AA seq
DB search
MIDVNNFEQMQISLASPDKIRSWSYGEVKKPETINYRTLKPEKEGLFCERIFGPQKDWKC
SCGKYNGIRYKGIVCDRCGVEVTRSKVRRERMAHIELAAPVTHVWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVIEPGDATLEAKQLLTEREYREKRAQYGNSFHAAMGAEAIKQLLQ
RVDLEAECEELKEQLKTATGQKRTRAIRRLDILDAFRVSGNKPEWMVMDVVPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPNIIVQNEKRMLQEAVDALIDNGR
RGRPVVGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPFLKMYQCGLPKE
MALELFKPFLMKELVQRELAGNIKNAKRKIERMDDDVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPVLVEGKAIRLHPLVCEAYNADFDGDQMAVHVPLSEEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTMEEKGAVGEGMIFSNPNEVEMAYQNGYVHWHTRIALY
TKSLPAKPWKDHQKDALLVTTVGKVMFNAIMPDEFPYLNEPTQENLEEATPDKYFIDAST
NVKEFIEAQEIVGPFKKKNIGNIIAAVFKKFHVTETSRMLDKMKDLGYSVSTRSGITVGM
ADILVLESKKEIIEKAHKQVEATTRQFRRGLISDDERYNSVINTWNQAKDLIQIELMKSL
GQENPIFMMSDSGARGNISNFTQLAGMRGLMASPSGKIMELPVISNFREGLTVLEMFSST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIVRDDDCGTDGGLDIMAIREGNEIIESLE
ERLIGRYAQKSIIHPETGAVLVAHNELITEDKAREIIDAGIEKVTIRSVFTCNTRHGVCK
FCYGMNLATGNEVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVVTEVTGEVISIDENAAERSKEVTVKGVTDTRTYSVPYTARMKVEEGDFVH
RGAPLTEGSIDPKELLRVRDVLSVETYLLREVQKVYRMQGVEIGDKHIEVMVRQMLRKVR
IMDPGSTEILPGTLMDIADFTDRNAASIRAGEVPATARPVLLGITKASLETNSFLSAASF
QETTRVLTDAALRGKTDDLLGLKENVIIGKTIPAGTGMARYRKMDPQAVNIGTSSVYSIA
DSANAEDSLIGSTDLTEE
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
ttgatagatgtaaataatttcgaacaaatgcaaatctctttggcttcacctgataaaatc
cgtagctggtcttacggggaagttaaaaaaccagagacaattaactatagaacattgaag
cctgaaaaagagggtctgttctgtgaaagaatctttggaccacaaaaagattggaaatgt
tcatgtggaaaatataacggtatccgttataaaggtatcgtttgtgaccgctgtggtgta
gaagtaacgcgctctaaagttcgtcgtgaacgtatggcgcatatcgaattagcagcacca
gttacacacgtatggtacttcaaaggtattccaagtcgtatgggtcttgtattagatatg
agtccgcgtgcgctagaagaaatcatttattttgcaagctatgtggttatcgaaccaggt
gacgcaacattagaagcaaaacaattgttaactgaacgtgaatatcgcgaaaaacgtgca
caatatggaaatagcttccatgctgcaatgggtgcagaagcaattaaacaattacttcaa
cgcgttgaccttgaagcagaatgtgaagaattaaaagaacaactaaaaacagcaacaggc
caaaagcgtacgcgtgctatccgtcgtttagacatcttggatgcattccgcgtatctggc
aacaaacctgagtggatggttatggacgttgttccagttatcccaccagacttgcgccca
atggttcaattagagggtggccgttttgcaacaagtgacttgaacgatttataccgccgt
gtcattaaccgtaacaaccgtttgaaacgtttgttagacttaaatgcaccaaatattatt
gttcaaaacgaaaaacgtatgttacaagaagcagttgatgctttgattgacaacggtcgt
cgtggtcgtccagttgtaggaccaggaaaccgtccattgaaatctctatcacatatgttg
aaagggaaacaaggtcgtttccgtcaaaacttacttggtaaacgtgtagactattctggt
cgttcggttatcgttgtaggaccattcttgaagatgtaccaatgtggacttccaaaagaa
atggcactagaactatttaaacctttcttgatgaaagaattagttcaacgtgaattagca
ggaaatattaaaaatgcgaaacgcaaaatcgaacgtatggacgatgatgtgtgggacgtt
ttagaagaagttatccgtgaacatccggttctattgaaccgcgcaccgacactacacaga
ctaggtatccaagcctttgaacctgttttagttgaaggtaaagcgattcgtcttcacccg
ttagtatgtgaggcttacaatgccgactttgacggtgaccaaatggccgttcacgttccg
ttaagtgaagaagcacaagcagaagcacgtctattgatgcttgcagcacaaaatatcttg
aaccctaaagatggtaaaccagttgttacaccatctcaggatatggttctaggtaactac
tacttaacaatggaagaaaaaggtgcggttggagaaggtatgattttctctaatccaaat
gaagtagaaatggcataccaaaatggttatgtacactggcatacgcgtattgccttgtat
acaaaatcattaccagctaaaccatggaaggatcaccaaaaagatgcccttcttgtaaca
actgttggtaaagttatgttcaacgctattatgcctgatgagttcccatatttaaacgaa
ccaactcaagaaaacttagaagaagcaacaccagataagtactttatcgatgcaagtaca
aacgtgaaagaatttattgaagcacaagaaattgtaggaccatttaagaagaaaaacatt
ggtaatatcattgctgctgtcttcaaaaaattccatgttactgaaacatcacgcatgctt
gataagatgaaagacttgggttacagcgtctctactcgttcaggtattacagtaggtatg
gctgacattcttgtattggaatctaaaaaagaaattatcgaaaaagctcataaacaagtt
gaagcaacgacaagacagttccgtcgtggtttgatctctgatgatgagcgttacaacagt
gttattaacacttggaatcaagcaaaagacttgatccaaattgaactgatgaaatctcta
ggtcaagaaaacccaatcttcatgatgagtgactcaggtgcccgtggtaacatctccaac
tttacacagcttgctggtatgcgtggtttgatggcatcaccatctggtaaaatcatggag
ttaccggttatttctaacttccgtgaaggactaacagtcttagaaatgttctcttctact
cacggtgcccgtaaaggtatgaccgatacggctctgaaaactgccgattcaggttactta
acacgtcgtctagtagacgttgcacaagatgttatcgttcgtgatgatgattgtggaact
gatggtggtttggatatcatggctatccgtgaaggaaatgaaatcatcgaatcactagaa
gaacgcctaatcggacgttacgctcaaaaatcaattattcaccctgaaacaggtgctgtt
ttagttgcacataacgagctaattacagaagataaagcaagagaaatcattgatgcaggt
attgaaaaagtaacgattcgttcagtctttacatgtaacacacgtcatggtgtatgtaag
ttctgttacggtatgaacttagcaactggtaacgaagttgaagttggggaagcagttggt
acaattgccgctcaatcaatcggtgaaccaggtactcagttgaccatgcgtacattccat
acgggtggggttgccggagatgatattactcaaggtttacctcgtatccaagaaattttc
gaagcacgtaatccgaaaggacaagcagttgttacggaagtaacgggagaagtaatctca
attgacgagaatgctgcagaacgttcgaaagaagtaacggttaaaggtgtaacagataca
cgtacttattccgtgccttatacagcacgtatgaaagtagaagaaggtgatttcgttcac
cgtggtgcgccattaacagaaggttcaatcgatccaaaagaattgttacgtgttcgtgat
gtgttatcggttgaaacatacttactacgcgaagttcagaaagtataccgtatgcaaggg
gtagaaatcggagacaagcatattgaagtaatggttcgccaaatgttacgtaaagtacgt
atcatggacccaggttcaacagaaatcttgccaggtacattgatggatattgctgacttt
actgaccgaaatgctgctagcattcgtgcaggagaagttccagcaacagctcgtccagta
ttattagggatcactaaagcttccttggaaacaaacagcttcctttctgctgcatcattc
caggaaacgacacgtgttcttactgatgctgcattacgtggtaagacagatgacttatta
ggtctgaaagaaaatgttattatcggtaagacaatccctgcaggtacgggtatggctcgt
taccgcaagatggatccacaagctgttaatattggtacatctagtgtttacagcattgct
gattcagcaaatgcagaagattctttaatcggttcaacagatttaactgaagaataa
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