Jeotgalibaca arthritidis: G7057_07035
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Entry
G7057_07035 CDS
T06477
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
jar
Jeotgalibaca arthritidis
Brite
KEGG Orthology (KO) [BR:
jar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jar03016
]
G7057_07035 (thpR)
Enzymes [BR:
jar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
G7057_07035 (thpR)
Transfer RNA biogenesis [BR:
jar03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
G7057_07035 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QII82210
UniProt:
A0A6G7KAC9
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All DBs
Position
1367215..1367760
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AA seq
181 aa
AA seq
DB search
MRVFVGIQFSSALKDDLEAYQAKLADWSEKGRLTRKENFHLTLCFIGEISETDYVQLFKQ
LSEKLAKTDRFSLLGGECGYFIKKNRYIPWVGVLLTADLLAVFKKVEAVIKEMGLAVEDR
PYTPHVTMARQVVLLDEEKWCHQPVAFNECVSQVTLFQSHQVDGQLAYTPLNHILLNKQK
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagagtctttgttgggattcaattcagctcagcgctgaaagatgatttagaagcttac
caagctaagttagctgattggtctgaaaaaggccgtttgactcgaaaggaaaactttcat
ttaacgctatgttttattggtgaaatcagtgaaaccgactatgtgcaattatttaagcag
ttatcagaaaaactagctaagacagaccgcttttctcttttaggtggtgagtgcggctat
tttattaagaaaaatcgttatattccatgggttggtgtgctattaacagcagacttgttg
gccgtttttaaaaaggttgaagctgttataaaagaaatgggattggctgttgaagaccgg
ccctatacgcctcatgtaactatggctaggcaagttgttttactggatgaagagaagtgg
tgtcatcagccagttgccttcaatgagtgtgtgtctcaagtgacactttttcaaagtcat
caagtggatgggcagctagcctatacgcccttaaatcatattttattaaataagcaaaag
agctga
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