Jeotgalibaca arthritidis: G7057_08005
Help
Entry
G7057_08005 CDS
T06477
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
jar
Jeotgalibaca arthritidis
Pathway
jar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7057_08005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jar03019
]
G7057_08005
03009 Ribosome biogenesis [BR:
jar03009
]
G7057_08005
Enzymes [BR:
jar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G7057_08005
Messenger RNA biogenesis [BR:
jar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7057_08005
Ribosome biogenesis [BR:
jar03009
]
Prokaryotic type
rRNA helicases
G7057_08005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Helicase_RecD
AAA_19
UvrD-helicase
AAA_22
Flavi_DEAD
Phage_integrase
Motif
Other DBs
NCBI-ProteinID:
QII82381
UniProt:
A0A6G7KB01
LinkDB
All DBs
Position
1576940..1578418
Genome browser
AA seq
492 aa
AA seq
DB search
MSQNRFSEYLLDESIIKSLTVLKYTEPTAVQKEVLPLLLNKKDVIVKSQTGSGKTAAFGI
PLCQLVNWEERAPQTLILTPTRELAMQIKEEIFNIGRYKRLKVEALFGKSSYQSQVKNLK
QRTHIVVATPGRLFDHIERGTIDLSKIKTLIIDEADEMFAMGFIDQVEDILHELPLDRTT
ALFSATMPAAVKKLTESFLKNPRYVEIADTAQSKKRIRQQYIRVEEDDKLATLKDLLIVD
NPDSSILFCNTKIMVDRLMKELDRADIKVDMLHGGMEQRDRTQVINDFKRGYFRHLVATD
VAARGIDVSDIALVVNYDIPDKPETYVHRIGRTARFENKGKALSLVIPRDRGSFAAILEA
QEHALEEIPRPSRATVDKYRLDFDQKQKKNPMIRKEIGLDFKEDIMKIHINAGKKTKMRP
GDVVGAICNVEGVTGEDIGVINLMDVSTFVEILNGKGEKVLKALQIMPIKGRKRRVSRSN
ESEYERDLRNGY
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaatagattttcagaatacctgttggatgaatcgattatcaagtcactaact
gttttaaagtataccgagccgactgctgttcaaaaagaggttttacctctcttattaaat
aaaaaagatgtgattgtcaaatctcagaccgggagtgggaaaactgctgcatttggaatt
ccactctgtcaattagtcaattgggaagaacgagcacctcagaccttgattttaacgccg
acacgtgaattagcgatgcaaattaaagaagagatttttaatatcggtcgttacaaacgt
ttgaaagtcgaagccttatttggtaaaagttcttatcaatcacaagtcaaaaacttaaag
caacggacacatattgtggtagcaacacctggtcgtttatttgaccatatcgaaagagga
acgattgatttaagtaagattaaaaccttaatcattgatgaagcggatgaaatgtttgcg
atgggctttattgatcaagtggaagatattttacatgagttgccactcgatcgcacaacg
gccttattctcggcaaccatgccggctgctgttaaaaaattaacggaaagcttcttaaaa
aatccgagatatgttgaaattgccgatacagcacaatcgaagaaacgcattcgtcaacaa
tacattcgtgtagaagaggacgataaattagcaacattaaaagatctattaatcgtcgat
aatccagatagtagtattctcttttgtaatacgaaaatcatggttgaccgcctaatgaag
gaattagatagagccgatattaaagtggatatgttacatggtggcatggaacaaagagac
cgtacccaagtaatcaacgatttcaaacgtggttatttccgacatttagtcgcaacggat
gtagcagcaagagggattgatgtttcagatatcgctttagtcgtcaactatgatataccg
gacaaaccagaaacctatgttcatcgtattggccggacggcacgttttgaaaataaaggg
aaagcattgtcgttagttattcctcgtgaccgaggttcttttgcggcgattttagaagcc
caagagcatgctcttgaggaaattcctcgtccaagtcgtgcaaccgttgataaatatcgt
ttagattttgatcaaaaacaaaagaaaaatccaatgattcgtaaagaaattggacttgat
tttaaagaagacattatgaaaatccatattaatgcaggtaagaaaacgaaaatgagacct
ggcgatgtcgtaggggcaatctgtaatgtcgaaggcgtaacaggcgaggacatcggtgtg
attaatttaatggacgtttccacttttgtagaaatcttaaatggcaaaggggaaaaagta
ttaaaagccctgcaaatcatgccaatcaaaggtcgcaagcgtcgagtgagtcgttcaaat
gagagcgaatatgaaagagacttacgtaacggttattag
DBGET
integrated database retrieval system
