Jeotgalibaca arthritidis: G7057_09800
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Entry
G7057_09800 CDS
T06477
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
jar
Jeotgalibaca arthritidis
Pathway
jar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7057_09800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jar03019
]
G7057_09800
Messenger RNA biogenesis [BR:
jar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G7057_09800
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
DUF3804
Motif
Other DBs
NCBI-ProteinID:
QII82700
UniProt:
A0A6G7KBS6
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Position
1940118..1941794
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AA seq
558 aa
AA seq
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MSEIKIIPLGGVRENGKNMYVVEVDELIFVLDCGLMYPDNELLGIDVVIPDFTYLEENKN
RIAGIFLTHGHEDAVGALPYFLENIDAPVFGTELTIELAKISVKSTGLNPNFNNYHVINE
KTEIEFDNVTVKFFRTTHSIPDSVAICLDTQDGTIVYTGDFKFDQSASDMYKTDFAAISL
IGQKNVLALMSDSSDAESYVENVSDMRVTEEIIDTFNNAEGRVIVSCVASNVMRIQQVLD
AAHQTKRKIFMTGSKLVQVVDTAINLGKLVLPSKNVIVTEKNLDQYSDDELVILETGQSG
EPFEALQRMSKGKHKQVNIKDGDLVYITTTPSTSMEKVVGRTKNMIYGAGGSVKEISDTF
KVSGHATPNDLKLMMNLLHPTFFIPVQGDYRVQAAHAELAHEVGISYKNIFIPGKGDVIE
YKDGRMRMAGQVAAGNVLIDGIGVGDIGNIVLRDRKLLADDGVFIAVVTISRRQGRIVSG
PEIISRGFVYMKASEDLIKESTEITKKVVEDNLENKDFEWSTLKQEIRDSLSRYLFDKTK
RRPVILPIIMEASSYLKK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaataaaaatcattccgttaggtggagtccgtgagaacggaaaaaatatgtat
gtcgtcgaagtagacgaattaatttttgtattagattgtggattaatgtatccagataat
gaactactaggtattgacgtggtgattccagactttacctatttagaagaaaataaaaac
cgtattgctggtattttcttaacgcatggtcatgaagatgcggttggtgcattaccatac
ttcttagaaaatattgatgcaccggttttcggtaccgagctaaccatcgaattagcgaaa
atctcagtgaaaagtacaggcttgaatccaaatttcaataactaccatgttattaatgaa
aaaacagaaattgaatttgataatgtgacggttaaattcttccgtacaacacattctata
ccggattcagttgctatttgcttggatacacaagatggcaccattgtttacacgggtgac
ttcaagtttgatcaaagtgcttctgatatgtataaaactgactttgcagctatttcgtta
attggtcaaaaaaatgttttagcattgatgagtgattcaagcgatgctgaatcttacgtt
gaaaatgttagtgatatgcgtgtcacagaagaaatcattgatacctttaataatgcagaa
ggtcgtgttattgtttcttgcgtagcaagcaatgtgatgcgtattcaacaagtcttagat
gcagctcaccaaacgaaacgcaaaatctttatgacaggcagcaaactggttcaggtggtt
gatacagctattaacttaggtaaattagtattaccatctaaaaatgtcattgtgacagag
aaaaacctggatcaatattcagatgatgaactagttattttagaaacaggacaaagtggg
gaaccctttgaagcattacaaagaatgtcaaaaggtaaacacaaacaagtcaacattaaa
gacggcgatttggtttatattacaacaacaccatcaacatcgatggaaaaagttgtcgga
cgtactaaaaacatgatatatggtgctggcggaagcgtaaaagaaatttctgatacgttt
aaagtatccggtcatgctacaccaaatgacttgaagttaatgatgaatttactacaccca
acattctttattcctgtacaaggtgactaccgtgttcaagcagctcatgctgaattggcg
cacgaagtgggtatttcttacaaaaacatctttattcctggtaaaggcgatgtgattgaa
tacaaagatggtcgtatgagaatggcaggtcaggtagcagctggaaatgtcttgattgat
ggtattggggtaggcgatattgggaatattgtcttaagagaccgtaaattattggcagat
gatggcgtatttatcgctgttgtgactatttctcgtcgtcaaggcagaatcgtttcaggt
ccagaaattatttctcgaggctttgtttatatgaaagctagcgaagatttaataaaagaa
agtaccgaaattacgaaaaaagtagtagaagataatctagaaaacaaagattttgaatgg
tctacgttaaaacaagagattcgtgattcattgagtcgttacttgtttgataagaccaaa
cgtcgtcctgttattcttccaatcattatggaagcatctagctatttaaaaaaataa
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