KEGG   Jeotgalibaca arthritidis: G7057_09800
Entry
G7057_09800       CDS       T06477                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
jar  Jeotgalibaca arthritidis
Pathway
jar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:jar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    G7057_09800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:jar03019]
    G7057_09800
Messenger RNA biogenesis [BR:jar03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     G7057_09800
SSDB
Motif
Pfam: RNase_J_C RNase_J_b_CASP Lactamase_B RMMBL Anti-Pycsar_Apyc1 Lactamase_B_2 DUF3804
Other DBs
NCBI-ProteinID: QII82700
UniProt: A0A6G7KBS6
LinkDB
Position
1940118..1941794
AA seq 558 aa
MSEIKIIPLGGVRENGKNMYVVEVDELIFVLDCGLMYPDNELLGIDVVIPDFTYLEENKN
RIAGIFLTHGHEDAVGALPYFLENIDAPVFGTELTIELAKISVKSTGLNPNFNNYHVINE
KTEIEFDNVTVKFFRTTHSIPDSVAICLDTQDGTIVYTGDFKFDQSASDMYKTDFAAISL
IGQKNVLALMSDSSDAESYVENVSDMRVTEEIIDTFNNAEGRVIVSCVASNVMRIQQVLD
AAHQTKRKIFMTGSKLVQVVDTAINLGKLVLPSKNVIVTEKNLDQYSDDELVILETGQSG
EPFEALQRMSKGKHKQVNIKDGDLVYITTTPSTSMEKVVGRTKNMIYGAGGSVKEISDTF
KVSGHATPNDLKLMMNLLHPTFFIPVQGDYRVQAAHAELAHEVGISYKNIFIPGKGDVIE
YKDGRMRMAGQVAAGNVLIDGIGVGDIGNIVLRDRKLLADDGVFIAVVTISRRQGRIVSG
PEIISRGFVYMKASEDLIKESTEITKKVVEDNLENKDFEWSTLKQEIRDSLSRYLFDKTK
RRPVILPIIMEASSYLKK
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgagtgaaataaaaatcattccgttaggtggagtccgtgagaacggaaaaaatatgtat
gtcgtcgaagtagacgaattaatttttgtattagattgtggattaatgtatccagataat
gaactactaggtattgacgtggtgattccagactttacctatttagaagaaaataaaaac
cgtattgctggtattttcttaacgcatggtcatgaagatgcggttggtgcattaccatac
ttcttagaaaatattgatgcaccggttttcggtaccgagctaaccatcgaattagcgaaa
atctcagtgaaaagtacaggcttgaatccaaatttcaataactaccatgttattaatgaa
aaaacagaaattgaatttgataatgtgacggttaaattcttccgtacaacacattctata
ccggattcagttgctatttgcttggatacacaagatggcaccattgtttacacgggtgac
ttcaagtttgatcaaagtgcttctgatatgtataaaactgactttgcagctatttcgtta
attggtcaaaaaaatgttttagcattgatgagtgattcaagcgatgctgaatcttacgtt
gaaaatgttagtgatatgcgtgtcacagaagaaatcattgatacctttaataatgcagaa
ggtcgtgttattgtttcttgcgtagcaagcaatgtgatgcgtattcaacaagtcttagat
gcagctcaccaaacgaaacgcaaaatctttatgacaggcagcaaactggttcaggtggtt
gatacagctattaacttaggtaaattagtattaccatctaaaaatgtcattgtgacagag
aaaaacctggatcaatattcagatgatgaactagttattttagaaacaggacaaagtggg
gaaccctttgaagcattacaaagaatgtcaaaaggtaaacacaaacaagtcaacattaaa
gacggcgatttggtttatattacaacaacaccatcaacatcgatggaaaaagttgtcgga
cgtactaaaaacatgatatatggtgctggcggaagcgtaaaagaaatttctgatacgttt
aaagtatccggtcatgctacaccaaatgacttgaagttaatgatgaatttactacaccca
acattctttattcctgtacaaggtgactaccgtgttcaagcagctcatgctgaattggcg
cacgaagtgggtatttcttacaaaaacatctttattcctggtaaaggcgatgtgattgaa
tacaaagatggtcgtatgagaatggcaggtcaggtagcagctggaaatgtcttgattgat
ggtattggggtaggcgatattgggaatattgtcttaagagaccgtaaattattggcagat
gatggcgtatttatcgctgttgtgactatttctcgtcgtcaaggcagaatcgtttcaggt
ccagaaattatttctcgaggctttgtttatatgaaagctagcgaagatttaataaaagaa
agtaccgaaattacgaaaaaagtagtagaagataatctagaaaacaaagattttgaatgg
tctacgttaaaacaagagattcgtgattcattgagtcgttacttgtttgataagaccaaa
cgtcgtcctgttattcttccaatcattatggaagcatctagctatttaaaaaaataa

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