Jeotgalibaca arthritidis: G7057_10545
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Entry
G7057_10545 CDS
T06477
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
jar
Jeotgalibaca arthritidis
Pathway
jar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
jar00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
G7057_10545 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jar03021
]
G7057_10545 (rpoD)
Transcription machinery [BR:
jar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G7057_10545 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DUF2408
Motif
Other DBs
NCBI-ProteinID:
QII82836
UniProt:
A0A6G7KC58
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All DBs
Position
2101113..2102249
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AA seq
378 aa
AA seq
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MAINKNEEGKTLEQVTNQVVKEHKLLGSIFYDDLTDKIATPFQLDADQMDKLIQKMEDSG
VSVVDADGGPTARQLKTDESKKDDKKEKDKAAEEEELSAPAGVKINDPVRMYLKEIGRVS
LLTADEERDLAIRILDGDQEAKQELAEANLRLVVSIAKRYVGRGMHFLDLIQEGNMGLMK
AVEKFDHEKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVRIQRQLLQDL
GREPTPEEIGAEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEVTSPAEH
TAQTLLKEQLEEVLDTLTDREENVLRLRFGLDDGNVRTLEQVGKVFGVTRERIRQIEAKA
LRKLRHPSRSKQLKDFLE
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggccattaataaaaatgaagaaggcaaaacactcgagcaagtaaccaatcaggtggtt
aaagagcataaactgttaggctcaatcttctatgatgatttaactgacaaaattgcaaca
cctttccaactcgatgcggaccaaatggataaattaatccaaaaaatggaagacagcggc
gttagtgtcgttgatgcagacggtggaccaactgctcgtcagcttaagacagatgaaagc
aaaaaagacgataaaaaagaaaaagacaaagctgcagaggaagaagaactttctgcacca
gctggcgttaagattaatgacccagttagaatgtacttaaaagaaatcggtcgtgtgtca
ttactaactgctgatgaagaacgtgacttggcaattcgtattctagatggcgaccaagaa
gcgaagcaagaattagctgaagcaaacttacgtcttgttgtatcgattgctaaacgttat
gttggccgtggtatgcacttcttagacctgattcaagaaggtaacatgggactaatgaag
gctgttgagaaatttgaccatgagaaggggtttaaattctctacttacgcgacttggtgg
attcgccaggcaatcacgcgtgcaatcgctgaccaagctcgaacgattcgtatccccgtt
catatggttgaaacgattaataaattagttcgtatacaacgtcaacttcttcaagattta
ggtcgcgaaccgacaccggaagaaattggtgctgaaatggacttaccaactgaaaaagtt
cgtgaaatcttaaaaatcgctcaagaacccgtatcattggaaacgccaattggtgaagaa
gatgattctcatttaggtgattttattgaagaccaagaagtaactagtccagctgaacat
actgctcaaacgcttctaaaagaacaactagaagaagttttggacaccctaacagaccgt
gaagaaaacgtgcttcgtctacgttttggtttagatgatggtaatgttcgcaccttggag
caagtcggtaaagtgtttggtgtgacgcgtgaacgtattcgtcaaattgaagctaaggct
cttagaaaattacgacacccaagccgctcaaaacaactaaaagactttttagaataa
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