Jeotgalibaca arthritidis: G7057_11125
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Entry
G7057_11125 CDS
T06477
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
jar
Jeotgalibaca arthritidis
Pathway
jar03030
DNA replication
jar03430
Mismatch repair
jar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G7057_11125
03430 Mismatch repair
G7057_11125
03440 Homologous recombination
G7057_11125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jar03032
]
G7057_11125
03400 DNA repair and recombination proteins [BR:
jar03400
]
G7057_11125
Enzymes [BR:
jar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G7057_11125
DNA replication proteins [BR:
jar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G7057_11125
DNA repair and recombination proteins [BR:
jar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G7057_11125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
DNA_pol_A_exo1
RNase_H_2
Rv2179c-like
HHH_3
DnaA_N
DEDDh_C
Cu
TF_Zn_Ribbon
DUF6282
Motif
Other DBs
NCBI-ProteinID:
QII82943
UniProt:
A0A6G7KCF0
LinkDB
All DBs
Position
complement(2225318..2229643)
Genome browser
AA seq
1441 aa
AA seq
DB search
MNKKELFQQLLEQIQLKNEVDYLPYFNEGEVEQVYVYKKSKVWHFILRFPDILPFEIFQA
LTSNLTRAFKTIADIDLQIKAEKPVITDEKIIDYWDTVINRSNISSPIVKEILRNHAPIV
QDGVVTLQLANEITKNHLKDNYLSLIQQNFLVLGFPEFKIQVELNEKASEEMRTRYLERK
EEQEAIMIQQAEKNLKIYEEEQSKKADNGGMVEGPLQLGSNIPDKEEPRQMISITEEERS
VIVQGHVFDSEVRELRSGRKLLIFKVTDYSSSFSVKIFSNNEKDEANFEKVKKGIWVRVR
GSVQEDTFMRDLVINARDVNEVKVPERKDYAPDNEKRVELHLHSNMSSMDATNSVSDLVA
QAAKWGHKAIAITDHATAQAYPDAHAAGQKHGIKILYGVEANIVDDGVPVAYNPVHKELS
ESTYVVFDVETTGLSAVYDTIIEIAAVKMYKGNVIDTFEAFINPGVALSQLIINLTGITD
SMLRDAPNEAAVMPKFREFCEDGILVAHNASFDMGFINKSYERLGLGEAPNPVIDTLEMS
RFLHPQLKSHRLNTLAKRYNVNLEQHHRAVFDAETTGHLCWIFIKEAKEDHNILYHDQLN
DGVGKGDSYKQARPFHATIIAKNQDGLKDLFELLSLSFVQYYYRVPRIPRSLLMEKRENL
LIGSACSNGEIFEAMMQKGKEEASERAKFYDYIEVMPKGIYKPLIERELVKNESDLEEII
SELVTIGKELNKPVVATGNVHYLNREDAIYREILLGSLKINQGKKLNLPEAHFRSTDEML
NDFKFLGKDVAKEIVVENPNHVVDMVEEITPIKDKLYTPNIEGANDEIKELSYNEAKRLY
GEDLPDIVVKRLEKELKSIIGNGFAVIYLISQKLVHKSNEDGYLVGSRGSVGSSFVATMT
GITEVNPLPPHYRCPGCHYSHFINDGSIGSGYDLEEKACPSCGTMMDRDGHDIPFETFLG
FYGDKVPDIDLNFSGEYQAQAHAYTKVLFGEDYVFRAGTIGTVADKTAYGYVKGYERDHG
YHYSAAEVDRLAKGCTGVKRTTGQHPGGIIVIPDYMDVYDFTPIQFPADDQSSEWKTTHF
DFHSIHDNVLKLDILGHDDPTMIRMLQDLSGIDPVTIPPNDPEVMKIFSGTEVLGVTPEQ
IFSKTGTLGVPEFGTRFVRGMLEQTKPATFAELLQISGLSHGTDVYLGNAETLIRENNIP
LADVIGCRDDIMVYLIYHGMEDGIAFKIMESVRKGKGIPDDWQADMRANNIPEWYIQSCL
KIKYMFPKAHAAAYVLMALRVAYFKVHDPILYYCAYFSVRAYDFDLVAMSQGKEAIKAKM
KEIMDKGLEASVKEKNLLTVLEIANEMVERGFEFKMIDIDRSDATNFIIDGNSLIAPFRA
VPSLGENVAKQIVIAREEQPFLSKQDLQTRGKVSKTIIDYMTENGVLDGMPDENQLSLFD
F
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaagaacttttccagcagctgctagaacaaattcagctgaagaatgaggta
gactatctaccgtattttaatgagggtgaagtagagcaagtttatgtctataaaaaatca
aaagtttggcattttatccttcgcttccctgatattttaccatttgaaatctttcaagcc
ttgacctcgaatttgacacgcgcttttaagaccattgcagacattgatttgcaaataaag
gctgaaaaaccagtgattactgatgaaaaaattatagattactgggatacagtcattaat
cgtagtaatatctcatcaccaattgtaaaagaaattttaagaaatcacgcacctattgta
caagatggtgttgtgacattacagttagctaatgaaattactaaaaaccacttgaaagac
aattatctctctcttattcaacaaaatttcttagttctaggttttcctgagtttaaaatt
caagttgagttaaatgaaaaagcatcggaagagatgcgcacacgctacttggaacgcaaa
gaagaacaagaagctattatgattcagcaagccgagaaaaacttgaagatttatgaagag
gagcaaagtaagaaagccgataacggcggtatggttgaaggaccacttcaacttggctct
aatattccggataaagaagagccgagacaaatgatttcaataacagaagaggaacggtct
gttattgttcaaggacatgtttttgatagtgaggtcagagaactgcgctcaggaagaaag
ctacttatttttaaagtgactgattattcttcttcatttagtgttaagattttttctaat
aatgaaaaagatgaagcaaactttgaaaaagtgaaaaagggtatttgggttcgggttcga
ggtagtgttcaagaagatacctttatgagagatctcgtgattaatgcgagagatgttaat
gaagtaaaagttcctgaacgtaaagattatgctcctgacaatgaaaaacgtgtggaactg
cacttacattcgaatatgagttcaatggatgcgacgaatagtgtatctgatttagttgct
caggcagctaagtggggccataaagcaattgcaattactgaccatgcgactgctcaagcc
tatccagatgctcacgctgccggccaaaagcatggcataaaaatcctttacggtgttgaa
gcaaacattgtcgatgatggggttcccgttgcctacaatcctgttcacaaagagttatca
gaaagtacttatgttgtctttgacgttgagacaaccgggctatcagccgtttatgatacg
attattgagattgcggccgttaaaatgtacaagggaaatgtgattgatacattcgaagca
tttatcaatcctggggttgccttatcacaactcatcattaacttaacggggattacagat
tcgatgttacgcgatgcaccgaatgaagcagctgttatgcctaaattccgggagttctgt
gaagacggtattttagttgcccataatgcatcatttgatatgggtttcattaacaaatcc
tatgaacgtttagggttaggagaagcaccaaatcctgttattgatacactggagatgtct
cgctttttacatccgcaactaaaatcacatcgtttgaacacactagctaaacgttacaac
gttaatctggaacagcatcaccgggctgtttttgatgcggaaacaacaggccatttgtgc
tggatttttataaaagaagctaaggaagatcacaatattctctatcacgatcaactaaat
gatggtgttggaaaaggggactcctataaacaagcgcgtccattccatgcgacgattata
gccaaaaaccaggacggtctaaaagatttatttgaattacttagtctgtcatttgtgcag
tactattaccgagtacctcgtatcccacgcagtctcttgatggagaaacgtgaaaattta
ttaattggatctgcttgtagcaatggcgaaatatttgaagctatgatgcaaaaaggtaaa
gaagaagccagtgagcgcgcaaaattctacgattacatcgaagtcatgccaaaagggatt
tataaacctcttattgaacgtgaattagtgaagaatgaaagtgatttggaagaaatcatt
tcagagcttgttacaattggtaaggaactaaataaacccgttgtagcaacagggaatgtc
cattatttaaaccgtgaagatgccatttaccgtgaaatcttgttaggatcactcaaaatt
aaccaaggtaaaaagctaaacttgccggaagcacattttagatcaaccgatgagatgttg
aatgattttaaattcttaggtaaagatgtcgctaaggaaattgttgttgagaatcctaac
catgttgtcgatatggttgaagagattacgccaattaaagataaattatatacaccaaat
atcgaaggcgccaacgatgaaattaaagagctctcttataacgaagcgaaacgcctttat
ggtgaagatttgccagacattgttgtcaagcggttagaaaaggaactaaaaagtattatt
ggaaatgggttcgctgttatctacttgatttcacaaaaactcgttcataaatccaatgaa
gacggctatcttgttgggtcgcggggatcagttggttcaagttttgtggctactatgacg
gggattacggaagtaaatccgttaccgcctcactaccgctgtccaggctgtcattacagt
cacttcataaatgacggatcgattggttctggttatgacttggaagaaaaagcatgtcca
agctgtggcacgatgatggaccgtgacggccatgatattccatttgaaacattcttgggc
ttctatggggataaagttcccgatattgatttgaacttctcgggtgagtatcaagcacaa
gcccatgcttatacgaaagttctttttggtgaagactatgtattccgtgcaggaacaatt
ggtacagtagcggataaaacagcttatggttatgttaaaggttacgaacgagatcatggt
tatcattattcagctgcagaagttgatcggttagctaaaggctgtacaggcgttaaacgg
acaaccggacagcatccgggggggattatcgttattccagactatatggacgtttatgat
tttacaccaatccaattccctgctgatgaccaatcatccgaatggaaaacaactcacttt
gacttccattccattcatgacaatgtcttgaaactggatattctaggtcacgatgatccg
acaatgattcggatgttgcaagacttatccggtattgatcctgttacgattccaccaaat
gatcctgaggttatgaagatattctctggaacagaggtcttgggtgtcacaccagagcaa
atttttagtaagacaggtacactaggtgttccggagtttggaacgcgctttgttcggggc
atgctcgaacaaacgaaaccagcaacctttgccgaattacttcaaatctcaggtctatcg
catggtaccgacgtttatttagggaatgcggaaaccttaattcgtgaaaataatattcca
cttgccgatgttatcggctgtcgtgatgatattatggtttacctaatctatcatggtatg
gaagatggtattgcgttcaagattatggagagtgttcgtaaaggtaaaggcattccagat
gactggcaagcagacatgcgagctaataatattccagaatggtatattcaatcgtgctta
aaaatcaaatacatgttcccgaaagcccatgcggctgcctacgttttaatggcacttcgt
gttgcttactttaaagttcacgatccaatcttgtattactgcgcttatttctcagttcgt
gcttacgactttgatttggtagctatgtcacagggtaaagaagccattaaagctaaaatg
aaagagattatggataaagggctagaagcatcggttaaggagaaaaacctcttaacggta
cttgaaatcgctaatgaaatggtagaacgcggctttgaatttaaaatgattgatattgat
cgctctgatgccaccaacttcattattgatggtaatagcttaattgcgccatttagagca
gtaccaagtttgggagaaaacgtggccaagcaaattgtcattgcgcgtgaagaacaacca
ttcttatcaaaacaagatttacaaacaagaggtaaagtctctaaaaccattattgactac
atgactgaaaatggtgttttagacggtatgccagatgaaaaccaattgtcgctatttgac
ttctaa
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