KEGG   Jeotgalibaca arthritidis: G7057_11125
Entry
G7057_11125       CDS       T06477                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
jar  Jeotgalibaca arthritidis
Pathway
jar03030  DNA replication
jar03430  Mismatch repair
jar03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:jar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G7057_11125
   03430 Mismatch repair
    G7057_11125
   03440 Homologous recombination
    G7057_11125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:jar03032]
    G7057_11125
   03400 DNA repair and recombination proteins [BR:jar03400]
    G7057_11125
Enzymes [BR:jar01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     G7057_11125
DNA replication proteins [BR:jar03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     G7057_11125
DNA repair and recombination proteins [BR:jar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     G7057_11125
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NII DNA_pol3_a_NI HHH_6 tRNA_anti-codon DNA_pol_A_exo1 RNase_H_2 Rv2179c-like HHH_3 DnaA_N DEDDh_C Cu TF_Zn_Ribbon DUF6282
Other DBs
NCBI-ProteinID: QII82943
UniProt: A0A6G7KCF0
LinkDB
Position
complement(2225318..2229643)
AA seq 1441 aa
MNKKELFQQLLEQIQLKNEVDYLPYFNEGEVEQVYVYKKSKVWHFILRFPDILPFEIFQA
LTSNLTRAFKTIADIDLQIKAEKPVITDEKIIDYWDTVINRSNISSPIVKEILRNHAPIV
QDGVVTLQLANEITKNHLKDNYLSLIQQNFLVLGFPEFKIQVELNEKASEEMRTRYLERK
EEQEAIMIQQAEKNLKIYEEEQSKKADNGGMVEGPLQLGSNIPDKEEPRQMISITEEERS
VIVQGHVFDSEVRELRSGRKLLIFKVTDYSSSFSVKIFSNNEKDEANFEKVKKGIWVRVR
GSVQEDTFMRDLVINARDVNEVKVPERKDYAPDNEKRVELHLHSNMSSMDATNSVSDLVA
QAAKWGHKAIAITDHATAQAYPDAHAAGQKHGIKILYGVEANIVDDGVPVAYNPVHKELS
ESTYVVFDVETTGLSAVYDTIIEIAAVKMYKGNVIDTFEAFINPGVALSQLIINLTGITD
SMLRDAPNEAAVMPKFREFCEDGILVAHNASFDMGFINKSYERLGLGEAPNPVIDTLEMS
RFLHPQLKSHRLNTLAKRYNVNLEQHHRAVFDAETTGHLCWIFIKEAKEDHNILYHDQLN
DGVGKGDSYKQARPFHATIIAKNQDGLKDLFELLSLSFVQYYYRVPRIPRSLLMEKRENL
LIGSACSNGEIFEAMMQKGKEEASERAKFYDYIEVMPKGIYKPLIERELVKNESDLEEII
SELVTIGKELNKPVVATGNVHYLNREDAIYREILLGSLKINQGKKLNLPEAHFRSTDEML
NDFKFLGKDVAKEIVVENPNHVVDMVEEITPIKDKLYTPNIEGANDEIKELSYNEAKRLY
GEDLPDIVVKRLEKELKSIIGNGFAVIYLISQKLVHKSNEDGYLVGSRGSVGSSFVATMT
GITEVNPLPPHYRCPGCHYSHFINDGSIGSGYDLEEKACPSCGTMMDRDGHDIPFETFLG
FYGDKVPDIDLNFSGEYQAQAHAYTKVLFGEDYVFRAGTIGTVADKTAYGYVKGYERDHG
YHYSAAEVDRLAKGCTGVKRTTGQHPGGIIVIPDYMDVYDFTPIQFPADDQSSEWKTTHF
DFHSIHDNVLKLDILGHDDPTMIRMLQDLSGIDPVTIPPNDPEVMKIFSGTEVLGVTPEQ
IFSKTGTLGVPEFGTRFVRGMLEQTKPATFAELLQISGLSHGTDVYLGNAETLIRENNIP
LADVIGCRDDIMVYLIYHGMEDGIAFKIMESVRKGKGIPDDWQADMRANNIPEWYIQSCL
KIKYMFPKAHAAAYVLMALRVAYFKVHDPILYYCAYFSVRAYDFDLVAMSQGKEAIKAKM
KEIMDKGLEASVKEKNLLTVLEIANEMVERGFEFKMIDIDRSDATNFIIDGNSLIAPFRA
VPSLGENVAKQIVIAREEQPFLSKQDLQTRGKVSKTIIDYMTENGVLDGMPDENQLSLFD
F
NT seq 4326 nt   +upstreamnt  +downstreamnt
atgaataaaaaagaacttttccagcagctgctagaacaaattcagctgaagaatgaggta
gactatctaccgtattttaatgagggtgaagtagagcaagtttatgtctataaaaaatca
aaagtttggcattttatccttcgcttccctgatattttaccatttgaaatctttcaagcc
ttgacctcgaatttgacacgcgcttttaagaccattgcagacattgatttgcaaataaag
gctgaaaaaccagtgattactgatgaaaaaattatagattactgggatacagtcattaat
cgtagtaatatctcatcaccaattgtaaaagaaattttaagaaatcacgcacctattgta
caagatggtgttgtgacattacagttagctaatgaaattactaaaaaccacttgaaagac
aattatctctctcttattcaacaaaatttcttagttctaggttttcctgagtttaaaatt
caagttgagttaaatgaaaaagcatcggaagagatgcgcacacgctacttggaacgcaaa
gaagaacaagaagctattatgattcagcaagccgagaaaaacttgaagatttatgaagag
gagcaaagtaagaaagccgataacggcggtatggttgaaggaccacttcaacttggctct
aatattccggataaagaagagccgagacaaatgatttcaataacagaagaggaacggtct
gttattgttcaaggacatgtttttgatagtgaggtcagagaactgcgctcaggaagaaag
ctacttatttttaaagtgactgattattcttcttcatttagtgttaagattttttctaat
aatgaaaaagatgaagcaaactttgaaaaagtgaaaaagggtatttgggttcgggttcga
ggtagtgttcaagaagatacctttatgagagatctcgtgattaatgcgagagatgttaat
gaagtaaaagttcctgaacgtaaagattatgctcctgacaatgaaaaacgtgtggaactg
cacttacattcgaatatgagttcaatggatgcgacgaatagtgtatctgatttagttgct
caggcagctaagtggggccataaagcaattgcaattactgaccatgcgactgctcaagcc
tatccagatgctcacgctgccggccaaaagcatggcataaaaatcctttacggtgttgaa
gcaaacattgtcgatgatggggttcccgttgcctacaatcctgttcacaaagagttatca
gaaagtacttatgttgtctttgacgttgagacaaccgggctatcagccgtttatgatacg
attattgagattgcggccgttaaaatgtacaagggaaatgtgattgatacattcgaagca
tttatcaatcctggggttgccttatcacaactcatcattaacttaacggggattacagat
tcgatgttacgcgatgcaccgaatgaagcagctgttatgcctaaattccgggagttctgt
gaagacggtattttagttgcccataatgcatcatttgatatgggtttcattaacaaatcc
tatgaacgtttagggttaggagaagcaccaaatcctgttattgatacactggagatgtct
cgctttttacatccgcaactaaaatcacatcgtttgaacacactagctaaacgttacaac
gttaatctggaacagcatcaccgggctgtttttgatgcggaaacaacaggccatttgtgc
tggatttttataaaagaagctaaggaagatcacaatattctctatcacgatcaactaaat
gatggtgttggaaaaggggactcctataaacaagcgcgtccattccatgcgacgattata
gccaaaaaccaggacggtctaaaagatttatttgaattacttagtctgtcatttgtgcag
tactattaccgagtacctcgtatcccacgcagtctcttgatggagaaacgtgaaaattta
ttaattggatctgcttgtagcaatggcgaaatatttgaagctatgatgcaaaaaggtaaa
gaagaagccagtgagcgcgcaaaattctacgattacatcgaagtcatgccaaaagggatt
tataaacctcttattgaacgtgaattagtgaagaatgaaagtgatttggaagaaatcatt
tcagagcttgttacaattggtaaggaactaaataaacccgttgtagcaacagggaatgtc
cattatttaaaccgtgaagatgccatttaccgtgaaatcttgttaggatcactcaaaatt
aaccaaggtaaaaagctaaacttgccggaagcacattttagatcaaccgatgagatgttg
aatgattttaaattcttaggtaaagatgtcgctaaggaaattgttgttgagaatcctaac
catgttgtcgatatggttgaagagattacgccaattaaagataaattatatacaccaaat
atcgaaggcgccaacgatgaaattaaagagctctcttataacgaagcgaaacgcctttat
ggtgaagatttgccagacattgttgtcaagcggttagaaaaggaactaaaaagtattatt
ggaaatgggttcgctgttatctacttgatttcacaaaaactcgttcataaatccaatgaa
gacggctatcttgttgggtcgcggggatcagttggttcaagttttgtggctactatgacg
gggattacggaagtaaatccgttaccgcctcactaccgctgtccaggctgtcattacagt
cacttcataaatgacggatcgattggttctggttatgacttggaagaaaaagcatgtcca
agctgtggcacgatgatggaccgtgacggccatgatattccatttgaaacattcttgggc
ttctatggggataaagttcccgatattgatttgaacttctcgggtgagtatcaagcacaa
gcccatgcttatacgaaagttctttttggtgaagactatgtattccgtgcaggaacaatt
ggtacagtagcggataaaacagcttatggttatgttaaaggttacgaacgagatcatggt
tatcattattcagctgcagaagttgatcggttagctaaaggctgtacaggcgttaaacgg
acaaccggacagcatccgggggggattatcgttattccagactatatggacgtttatgat
tttacaccaatccaattccctgctgatgaccaatcatccgaatggaaaacaactcacttt
gacttccattccattcatgacaatgtcttgaaactggatattctaggtcacgatgatccg
acaatgattcggatgttgcaagacttatccggtattgatcctgttacgattccaccaaat
gatcctgaggttatgaagatattctctggaacagaggtcttgggtgtcacaccagagcaa
atttttagtaagacaggtacactaggtgttccggagtttggaacgcgctttgttcggggc
atgctcgaacaaacgaaaccagcaacctttgccgaattacttcaaatctcaggtctatcg
catggtaccgacgtttatttagggaatgcggaaaccttaattcgtgaaaataatattcca
cttgccgatgttatcggctgtcgtgatgatattatggtttacctaatctatcatggtatg
gaagatggtattgcgttcaagattatggagagtgttcgtaaaggtaaaggcattccagat
gactggcaagcagacatgcgagctaataatattccagaatggtatattcaatcgtgctta
aaaatcaaatacatgttcccgaaagcccatgcggctgcctacgttttaatggcacttcgt
gttgcttactttaaagttcacgatccaatcttgtattactgcgcttatttctcagttcgt
gcttacgactttgatttggtagctatgtcacagggtaaagaagccattaaagctaaaatg
aaagagattatggataaagggctagaagcatcggttaaggagaaaaacctcttaacggta
cttgaaatcgctaatgaaatggtagaacgcggctttgaatttaaaatgattgatattgat
cgctctgatgccaccaacttcattattgatggtaatagcttaattgcgccatttagagca
gtaccaagtttgggagaaaacgtggccaagcaaattgtcattgcgcgtgaagaacaacca
ttcttatcaaaacaagatttacaaacaagaggtaaagtctctaaaaccattattgactac
atgactgaaaatggtgttttagacggtatgccagatgaaaaccaattgtcgctatttgac
ttctaa

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