Janthinobacterium tructae: FJQ89_00010
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Entry
FJQ89_00010 CDS
T06359
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jas
Janthinobacterium tructae
Pathway
jas03420
Nucleotide excision repair
jas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FJQ89_00010
03430 Mismatch repair
FJQ89_00010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jas03400
]
FJQ89_00010
Enzymes [BR:
jas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJQ89_00010
DNA repair and recombination proteins [BR:
jas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FJQ89_00010
MMR (mismatch excision repair)
Other MMR factors
FJQ89_00010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QDG68980
UniProt:
A0A4Y6R904
LinkDB
All DBs
Position
1159..3105
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AA seq
648 aa
AA seq
DB search
MSTDNAPQFIPKRITPTPEQVAIQTAQKKVVLIDANAGAAKTTTLALRLAEALHRGRAPE
RMLALVFTEAARVALRQRLLEVGVPLGVVKRLVIDTFDAFAAKVLLQLENMQVASMRSDE
ELRPVAWEALEVVSEKYAHRYPLEINTTNGAIAEFLKLQLRTKARLDFQNPDFESNSLDD
NLELLGMSRTHYLWLREYEALRGADTGDIQFRAPFDATYDLVRMLDGDEPLRQQLPAFQI
IVADELHDLNEASFRLLTMLIRRGNAFFCGAGDKDQVIYTWSGADHRFLRQRFEQEFPAL
QRLPLTASYRYGPQLAQAVGVLKNKASVSALSRATHIDVLEYDHTQPQACSAQLIAALEH
AHAGTTAILLRDRDQAIRVETALFQSGIAYGLVDMNSYLLSLEVLMLRGMVAIARKDLHA
IKSGPRRGEILEALVAFAEIPFTRGELQQAKADVANYPDLLEGFLTNQLAKSHNQDKAAL
TLAAVDYLRALPADALAGDALQHIFGLMQLEQTARRIYVDPAQARVVARSLHGFIAVCRE
AGVALGGFAGWLGEMEEAVTVSTGKAKLVIACIDQIKGLEYNHVILPYLAVDEFPRSKTD
PLEEENRFYVAATRARDRLTLLTPEDPAWRSRYIAALQLKNKIVAPKA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
ttgagtacagataacgccccgcagttcattccaaaacgcatcacgcccacgccggagcag
gtcgccatccagacggcgcaaaagaaagtggtcttgatcgacgccaatgccggcgcggcc
aagacgacgaccctggccctgcgcctggccgaggccttgcaccggggccgcgcgcccgag
cgcatgctggccctcgtcttcacggaagcggcgcgcgtggccctgcgccagcgcctgctg
gaagtgggcgtgccgctcggcgtcgtcaagcgcctcgtcatcgacaccttcgacgccttt
gccgccaaggtgctgctgcagctggaaaacatgcaggtggcatccatgcgcagcgatgaa
gagctgcgccccgtggcctgggaagcactggaagtggtctccgagaaatacgctcaccgc
tatccgctggaaatcaatacgaccaacggggccatcgccgaattcctgaaactgcaattg
cgcaccaaggcgcgcctggattttcaaaatcctgacttcgagagcaattccctcgatgac
aacctcgagctgctgggcatgtcgcgcacgcattatctgtggctgcgcgaatacgaagcc
ttgcgtggcgccgacacgggcgatatccagttccgcgcgccgttcgacgccacctacgac
ctggtgcgcatgctcgatggcgacgagcccctgcgccagcaattgccggccttccagatc
atcgtggccgatgaattgcacgatttgaacgaagcgtcgttccgcctgctgaccatgctg
atacgccgcggcaacgcgtttttctgcggcgccggcgacaaggatcaagtcatctatacc
tggtcgggcgccgaccaccgcttcttgcgccagcgcttcgaacaggaattccccgccttg
cagcgcctgccgctgacggcatcctaccgctacggcccgcagctggcgcaggccgtcggc
gtgttgaaaaacaaggccagcgtgtcggccctgtcgcgcgccacccatatcgacgtgctc
gagtacgatcatacgcagccgcaagcgtgcagcgcccagctgatcgccgcgctcgaacac
gcgcatgcgggcaccacggccattttgctgcgcgaccgcgaccaggccatccgcgtggaa
acggccttgttccagagcggcatcgcgtatggcctggtggacatgaacagctatttgctg
agcctggaagtgctgatgctgcgcggcatggtcgccatcgcccgcaaggatttacatgcg
atcaagagcggcccgcgccgcggcgagattctcgaagccctggtggcgttcgcggaaatc
ccatttacgcgcggtgagctgcagcaagccaaggccgacgtggccaattacccggatctg
ctggaaggctttttgacgaatcagctggccaagtcgcacaaccaggacaaggcggcgctg
accctggccgccgtcgattacctgcgcgccttgccagcggacgccttggcgggcgacgcc
ctgcagcacatctttggcctgatgcagctggaacagacggcgcgccgcatctatgtcgac
ccggcgcaggcgcgggtcgtcgcccgttcactgcacggtttcattgccgtgtgccgcgaa
gcgggcgtggcgctcggtggctttgccggctggctgggcgagatggaagaggccgtgacg
gtctcgaccggcaaggccaagctggtgatcgcctgcatcgaccagatcaagggcctcgaa
tacaaccacgtgatcttgccctacctggccgtcgacgaattcccgcgcagcaagactgac
ccgctggaagaggaaaaccgtttctatgtggccgccacgcgcgcgcgcgacaggctcacc
ttgctgacgccggaggaccccgcctggcggagccgctacatcgccgccctgcagctgaaa
aacaagattgttgcgccgaaagcataa
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