Janthinobacterium tructae: FJQ89_11095
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Entry
FJQ89_11095 CDS
T06359
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
jas
Janthinobacterium tructae
Brite
KEGG Orthology (KO) [BR:
jas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jas03009
]
FJQ89_11095 (rlmD)
Enzymes [BR:
jas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
FJQ89_11095 (rlmD)
Ribosome biogenesis [BR:
jas03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
FJQ89_11095 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
MTS
RrnaAD
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_32
Methyltrans_SAM
Methyltransf_23
UPF0020
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
QDG70890
UniProt:
A0A4Y6RES9
LinkDB
All DBs
Position
complement(2517896..2519239)
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AA seq
447 aa
AA seq
DB search
MQENIIEIKSLDMDARGVGHIENEDGSPGKVVFVEGALPGERVSFVTYKKKKNWEMARMT
VLHRESSMRVTPKCKHFDNCGGCSMQHLEPSAQVAIKQRVLEDNLWHIGKVRPQSIMRPM
YGPTWGYRYRARLSVRHVKKKDAVLVGFHEKKSAFVADMDSCEILPPHISAMLLPLRGLI
ASLSIFDQMPQIELAVGEDVTAMVLRIMAPLTADDETKLKAFADEYGVQWWLQVKGPETA
VPFYPLDKQLHYLLPEFGVKMPFKPVDFTQVNHHINRVLVSKALRLLEVQPTDRVADLFC
GLGNFTLPLATQGSAVVGIEGSTTLTERALENALANGLAEKTSFSTRNLFEVTTDDLIAL
GKFDRILVDPPRDGAMALCQALVGLSQVRPDLLPKRIVYVSCSPSTLARDAGILALEAGY
VLSKAGVVNMFPHTSHVESMAVFDLPQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaatatcatcgaaatcaaatcgctcgacatggacgcccgtggcgttggccat
attgagaacgaagacggctcgccgggcaaggtcgtgtttgtcgaaggcgcgttgccgggc
gagcgcgtcagctttgtgacgtacaagaagaagaaaaattgggaaatggcccgcatgacg
gtgctgcaccgcgaatcgtcgatgcgcgtgacgcccaagtgcaagcatttcgataactgc
ggcggctgctcgatgcagcacctggaaccgtcggcgcaggtggcgatcaagcagcgcgtg
ctggaagataacttgtggcatatcggcaaggtgcgtccgcaaagtatcatgcgccccatg
tatggcccgacgtggggctaccgttaccgcgcgcgcctgtccgtgcgccacgtcaagaaa
aaggatgccgtgctggtgggcttccatgaaaagaaatcggctttcgttgccgacatggat
agctgcgaaatcttgccaccgcacatctccgccatgctgctgccgctgcgtggactgatt
gcttcgctgtcgatcttcgaccagatgccgcagatcgagctggccgtgggcgaagacgtc
acggccatggtcttgcgcatcatggcgccattgacggcggacgacgaaacgaaattgaag
gcctttgccgacgaatacggcgtgcaatggtggctgcaggtgaaagggccggaaacagcc
gtgccgttctatccgctggacaagcagttgcactacctgctgccggaattcggcgtcaag
atgccgttcaagccagtcgatttcacgcaggtgaaccaccacatcaaccgcgtgctggtg
tcgaaagccctgcgtttgctggaagtgcagccgaccgaccgcgtggctgacctgttctgc
ggcctgggcaatttcaccttgccgctggccacgcaaggcagcgcagtggtgggcatcgaa
ggcagtaccacgctgacggagcgggcgctggaaaacgcgctggccaatggcctggcggaa
aaaacctcgttctcgacgcgcaacctgttcgaagtgacgacggacgacctgatcgcgctg
ggcaagtttgaccgcatcctggtcgacccgccgcgcgatggcgccatggccctgtgtcag
gcgctggtcggtctgtcgcaagtgcgtcccgacctgctgccgaagcgcatcgtgtacgtc
tcgtgcagcccgtcgaccctggcgcgcgacgccggcatcctggcgctggaagcgggctat
gtgctgagcaaggcgggcgtggtgaacatgttcccgcacacttcgcatgtcgaatcgatg
gcggtatttgatttgcctcaataa
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