Janthinobacterium tructae: FJQ89_14630
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Entry
FJQ89_14630 CDS
T06359
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
jas
Janthinobacterium tructae
Brite
KEGG Orthology (KO) [BR:
jas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jas03016
]
FJQ89_14630
Enzymes [BR:
jas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FJQ89_14630
Transfer RNA biogenesis [BR:
jas03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FJQ89_14630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QDG71518
UniProt:
A0A4Y6RES4
LinkDB
All DBs
Position
complement(3341798..3343885)
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AA seq
695 aa
AA seq
DB search
MNLFFEESGDFKVGTVLSQAGEAYQVEMASGKRTKVKVKDVLLQYEKPAPAELLEQAKSI
AAEIDLDFLWEVAGEDEFGFAELGAEYFGHAPLPPEAAGLILALHSAPVYFYKKGRGRYK
AAPEASLKAALAGIEKKKQQALVQASYVEELKQNRLPASMQTMVLQLLFKPDKNTIEYKA
LEAACTELHTTPPRLMLAVGGIASPKDLHLSKFLFENFPKGAGFPSVPVPAVTAKLPLAE
VAAFSIDDVTTTEIDDAFSVQPLPDGTVKVGIHIAAPGLGIRPEDVIDKMARQRMSTVYM
PGDKITMLPDEIVNAFTLAEGTTCPALSLYATLDPKADWAVISTQTRAELVPIASNLRHN
QLDDLVNEETLASGEGEYPHKADFAVLWQWAQQLEQGRMKKREAFGLKPEQNNRVDFNFY
VENDIVTVARRKRGAPLDKIVAELMIFANSTWGKMLHDHGVPGIYRSQGGGSGNSWAAKM
QVRMVTHAAPHQGLGVDQYAWSTSPLRRYTDLVNQWQIIACAEHGVTAPLVAPFKPRDAN
LFAIVSAFDAAYAAYGDFQSNMERYWCLRWLHQENARQVDAVVLKDEILRLVDIPLVIKL
PGMPSVARGAQVKLDLLRWDEVDLSIEARLLEIAAVPDAAADAELDYEEEAGDDGADAGD
VAQEASPEAANQVSDADAEVAELASEDVVSEPEVK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaatctattttttgaagaatccggcgatttcaaggtcggcacggtcctgtcgcaagcg
ggtgaagcgtatcaagtggaaatggccagcggcaagcgcaccaaggtcaaggtcaaggat
gtgctgctgcagtatgaaaagccggccccggccgagttgctggagcaggccaagagcatt
gccgccgagatcgacctcgatttcctgtgggaagtggcgggcgaagacgagttcggcttt
gccgagctgggcgccgagtatttcggccacgcaccgctgccgccggaagcggccggcctg
atcctggccctgcattcggcgcccgtgtatttctacaagaaaggccgtggccgctacaag
gcggcaccggaagcgtcgctgaaggcggccctggccggcatcgaaaagaaaaagcagcag
gcgctggtgcaggcaagctatgtggaagagctgaaacagaaccgcttgcccgcctcgatg
cagacgatggtgctgcaactgctgttcaagccggacaagaacaccatcgaatacaaggcg
ctcgaagcggcgtgcacggaattgcacacgacgccgccgcgcctgatgctggccgtcggc
ggtattgcttcgccgaaagacttgcacctgtcgaaattcctctttgaaaatttccccaag
ggcgccggcttccccagcgtgcctgtacccgccgtgacggccaagctgccgctggccgag
gtggccgccttctcgatcgacgacgtgaccaccaccgagatcgacgatgctttctcggtg
cagccgctgcccgatggcaccgtgaaagtgggtatacacatcgccgcgccgggcctgggc
atccgcccggaagacgtgatcgacaagatggcgcgccagcgcatgtcgaccgtctacatg
ccaggcgacaagatcaccatgctgccggacgaaatcgtcaacgcgtttaccctggcggaa
ggcacgacgtgcccggccctgtcgctgtacgccacgctggacccgaaagccgactgggcg
gtcatcagcacgcagacgcgtgccgagctggtgccgattgccagcaatttgcggcataac
cagttagacgatctggtcaacgaggaaaccctggccagtggcgaaggcgagtacccgcac
aaggccgattttgccgtgctgtggcagtgggcgcagcagctggagcagggccgcatgaag
aagcgcgaagcgttcggcctgaagccggaacagaataaccgcgtcgatttcaacttttat
gtggaaaacgatatcgtcaccgtggcgcgccgcaagcgtggcgcgccgctggacaagatt
gtcgctgaactgatgatctttgccaacagtacctggggcaagatgctgcatgaccatggc
gtgccgggcatctaccgcagccagggcggcggcagcggcaatagctgggcggcaaagatg
caggtgcgcatggtcacccatgcagcgccgcaccagggcctgggcgtggatcaatacgcg
tggagcacctcgcctttgcgccgctacacggatctggtgaaccagtggcaaatcatcgcc
tgcgccgagcatggcgtgacggcgcccttggtggcgccattcaagccgcgcgatgcgaac
ctgttcgccatcgtttcggcgttcgacgccgcgtatgccgcgtatggtgatttccagtcg
aacatggaacgctactggtgcttgcgctggctgcaccaggaaaacgcgcgccaggtcgat
gccgtcgtcttgaaagacgagattttgcgcctggtcgacattccgctggtcatcaagctg
ccgggcatgccatcggtggcgcgcggcgcccaggtgaaactggacttgctgcgctgggat
gaagtcgacctgagcattgaagcgcgcctgctggaaatcgccgccgtgcccgatgcggcg
gccgatgccgagctcgactacgaggaagaagcgggcgacgacggtgccgacgcgggcgac
gtggcgcaagaagcttcgccggaagcggcgaaccaggtcagcgacgccgatgcggaagtg
gcggaactggccagcgaagacgtggtcagcgaacccgaggtcaaataa
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