Janthinobacterium tructae: FJQ89_15730
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Entry
FJQ89_15730 CDS
T06359
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
jas
Janthinobacterium tructae
Pathway
jas00020
Citrate cycle (TCA cycle)
jas00640
Propanoate metabolism
jas00660
C5-Branched dibasic acid metabolism
jas00720
Other carbon fixation pathways
jas01100
Metabolic pathways
jas01110
Biosynthesis of secondary metabolites
jas01120
Microbial metabolism in diverse environments
jas01200
Carbon metabolism
Module
jas_M00009
Citrate cycle (TCA cycle, Krebs cycle)
jas_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
jas00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FJQ89_15730 (sucD)
00640 Propanoate metabolism
FJQ89_15730 (sucD)
00660 C5-Branched dibasic acid metabolism
FJQ89_15730 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
FJQ89_15730 (sucD)
Enzymes [BR:
jas01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
FJQ89_15730 (sucD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
Motif
Other DBs
NCBI-ProteinID:
QDG71708
UniProt:
A0A4Y6RFB6
LinkDB
All DBs
Position
complement(3586345..3587226)
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AA seq
293 aa
AA seq
DB search
MSILINKDTKVVTQGITGKTGQFHTRGCRDYANGKAAFVAGVNPKKAGEDFEGIPIFASV
TEAKQETGANVSVIYVPPAGAAAAIWEAVEAEMDLAICITEGIPVRDMMALKDRMAKSGS
KTLLLGPNCPGLITPDEIKIGIMPGHIHKKGRIGVVSRSGTLTYEAVGQLTALGLGQSSA
VGIGGDPINGLKHIDIMKMFNDDPDTDAVIMIGEIGGPDEANAAYWIKDNMKKPVVGFIA
GVTAPPGKRMGHAGALISGGADTAQAKLEIMEACGITVTKNPSEMARLLKAML
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctgatcaataaagataccaaagtcgtaacccaagggatcaccggcaagacc
ggtcagttccacacccgcggttgccgcgactacgcgaacggcaaagctgccttcgtggca
ggcgtgaacccgaagaaagccggcgaagacttcgaaggcattcctattttcgctagcgtc
accgaagcgaaacaagaaaccggcgccaacgtttccgtgatctacgtgccgccagcaggc
gcggcagcggcgatctgggaagctgtcgaagctgaaatggatctggctatttgcatcacc
gaaggcattcctgtccgtgacatgatggccttgaaagaccgcatggccaagtcgggcagc
aaaacgctgctgctgggccctaactgcccaggcctgatcacgccagacgaaatcaagatc
ggcatcatgccaggtcacatccataaaaagggccgcatcggcgtggtatcgcgttcgggt
accctgacctatgaagcagtcggtcaattgaccgcactgggcctgggccaatcgtcggca
gtcggcatcggcggcgacccgatcaacggtctgaagcacatcgacatcatgaagatgttc
aatgacgatccagataccgacgcggtcatcatgatcggcgaaatcggcggtccggacgaa
gccaacgcggcgtattggatcaaagacaacatgaaaaaaccggtcgtcggcttcatcgct
ggcgtgaccgctcctccaggcaagcgcatgggccacgccggcgcgctgatctcgggcggt
gccgatacggcacaagccaagctggaaatcatggaagcttgcggcatcaccgtaaccaaa
aacccgtcggaaatggcgcgtctgctgaaagccatgctgtaa
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