Janthinobacterium tructae: FJQ89_16090
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Entry
FJQ89_16090 CDS
T06359
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
jas
Janthinobacterium tructae
Pathway
jas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJQ89_16090 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jas03019
]
FJQ89_16090 (recQ)
03400 DNA repair and recombination proteins [BR:
jas03400
]
FJQ89_16090 (recQ)
Enzymes [BR:
jas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJQ89_16090 (recQ)
Messenger RNA biogenesis [BR:
jas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FJQ89_16090 (recQ)
DNA repair and recombination proteins [BR:
jas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FJQ89_16090 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
GARS_N
Motif
Other DBs
NCBI-ProteinID:
QDG71770
UniProt:
A0A4Y6RHD1
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All DBs
Position
3666362..3668185
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AA seq
607 aa
AA seq
DB search
MNQDLNQRALHLLQTVFGYPAFRGQQADIVDHVSHGGDALVLMPTGGGKSLCYQIPALLR
DGVGVVVSPLIALMQDQVDALAEVGVRAAFLNSTQTYEEASRIERLVRTGGIDVVYVAPE
RLMTQRCLDLFQASKISLFAIDEAHCVAQWGHDFRPEYIKLSVLHEQFPDVPRIALTATA
DPQTRAEIAMRLQLEDARQFVSSFDRPNIRYQIVEKANGRKQLLDFINTEHTGDCGIVYC
LSRKKVEETAEFLNQSGIRALPYHAGMEYAKRSANQARFLREENIVMVATIAFGMGIDKP
DVRFVAHLDLPKSIEGYYQETGRAGRDGMAANAWMAYGLQDVVLQRRMIDESEADDTFKR
VLGVKLDAMLGLCETLSCRRMRLLEYFGEPASPCGNCDTCLVPPVSFDGTVPVQKLLSAI
YRVDQRFAGGHVIDVLRGVESERIKTWHHDSLSVFGIGSDLGEAEWKAILRQAIALGLVS
VDHEQYSSLKLTDASRPVLKGGQKVQLRQYQKPVKTSKRSTSVAKGYVETDLSTSEQAIF
DKLRWWRVETARTHNVPAYVIFVDATLREIAKAKPTSLEQMRGVSGVGEKKLASYGDEIV
AMILEMM
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagatcttaaccagcgcgcgctgcacctgctgcaaaccgttttcggctatccg
gccttccgcggccagcaagccgacatcgtcgaccacgtcagccatggcggcgacgcgctg
gtgctgatgcccacgggcggcggcaagtcgctgtgctaccagattcccgcgctgctgcgc
gatggcgtgggcgtcgtcgtctcgccgctgatcgcgctgatgcaggaccaggtggacgct
ttggccgaagtcggcgtgcgcgccgccttcctcaattccacgcaaacctacgaagaagcg
agccgcatcgagcgcctggtgcgcacgggcggcatcgacgtcgtctacgtggcgcccgag
cgcctgatgacgcagcgttgcctggacctgttccaggcgtcgaagatctccctgttcgcc
atcgacgaggcgcattgcgtggcccagtggggccatgacttccgtcccgaatacatcaag
ctgtcggtgctgcacgagcagttcccggacgtgccgcgcatcgcgctcacggccactgcc
gacccgcagacgcgcgccgaaatcgccatgcgtttgcagctggaagacgcgcgccagttc
gtctcgtccttcgaccgtccgaacatccgctaccagatcgtggaaaaggcgaatggccgc
aagcagctgctcgacttcatcaacacggaacacacgggcgactgcggcatcgtctactgc
ctgtcgcgcaagaaggtcgaagagacggcggaatttttgaaccagagcggcatccgcgcc
ctgccgtatcacgccggcatggagtacgccaagcgcagcgccaaccaggcgcgcttcctg
cgcgaagaaaacatcgtcatggtcgccaccatcgccttcggcatgggcatcgacaagccc
gacgtgcgcttcgtggcgcatctggatctgccgaaaagcatcgagggctattaccaggaa
acaggccgcgctggccgcgacggcatggccgccaatgcctggatggcgtacggcttgcag
gacgtggtgctgcagcggcgcatgatcgacgaatcggaagcggacgacactttcaagcgc
gtgctgggcgtgaaactcgacgccatgctgggcctgtgcgaaaccctcagctgccgccgc
atgcgcttgctcgaatacttcggcgaaccggcttcgccgtgcggcaattgcgacacctgc
ctggtgccgcccgtgtcgttcgacggcaccgtgcccgtgcaaaaactgctgtcggccatc
taccgcgtcgaccagcgcttcgccggcggccacgtgatcgacgtactgcgcggcgtggaa
tcggaacgcatcaagacctggcaccacgattccttgtccgtcttcggcatcggctcggac
ctgggcgaagcggaatggaaagcgatcctgcgccaggccatcgcgctgggcctcgtctcg
gtcgaccatgaacaatacagctcgctgaaactgacggacgcttcgcgccccgtgctcaag
ggcggccagaaggtgcagctgcgccagtaccagaaaccggtcaaaaccagcaagcgcagc
accagcgtggcgaaaggctatgtcgagacggacctgtcgaccagcgagcaagcgatcttc
gacaagctgcgctggtggcgcgtggagacggcgcgcacgcacaatgtgccggcctacgtc
atcttcgtcgacgccaccctgcgcgaaatcgccaaggccaagcctacctcgctggagcag
atgcgcggcgtgagcggcgtgggcgagaaaaaactggcctcgtacggcgacgaaatcgtc
gccatgatcctggagatgatgtga
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