Janthinobacterium tructae: FJQ89_19795
Help
Entry
FJQ89_19795 CDS
T06359
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
jas
Janthinobacterium tructae
Pathway
jas00300
Lysine biosynthesis
jas00470
D-Amino acid metabolism
jas01100
Metabolic pathways
jas01110
Biosynthesis of secondary metabolites
jas01120
Microbial metabolism in diverse environments
jas01230
Biosynthesis of amino acids
Module
jas_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
jas00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FJQ89_19795 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FJQ89_19795 (dapF)
Enzymes [BR:
jas01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FJQ89_19795 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QDG72406
UniProt:
A0A4Y6RIH5
LinkDB
All DBs
Position
complement(4508106..4508969)
Genome browser
AA seq
287 aa
AA seq
DB search
MKLQFTKMHGAGNDFIVIDAINQDIDFTPAQWQRLADRRFGIGADQILVVEKPRLPGCDF
RYRIYNNDGGEVEQCGNGARAFVKFVSEKGLSDKASIRVETMAGIIAPRLEADGSITVDM
GAPVLEPALVPFDAAGLAGAAEGSDTLWPLDLALPGHSSPVLVSVVSMGNPHAVQVVDDV
DAQDLEQSGPLIEHHPRFPRRVNAGYLQIVDRHHVKLRVYERGAGETLACGTGACAAAVA
GILRGRLDSPVRISARGGELSIAWQGPGQPVLMTGPAVTVFEGTIEL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccaatttaccaagatgcatggcgccggcaatgacttcatcgtcatcgacgcc
atcaatcaagatatcgacttcacgccggcccagtggcagcgcctggccgaccgccgtttc
ggtatcggcgccgaccagatcctggtggtggaaaagccgcgcctgcccggctgcgacttc
cgctaccgtatctataacaacgatggcggcgaagtcgagcaatgcggcaacggcgcgcgc
gccttcgtcaagttcgtcagcgaaaaaggcttatccgacaaggcgagcatccgcgtggaa
accatggccggcatcattgcgccgcgcctggaagcggatggcagcatcacggtcgacatg
ggcgcgcctgtgctggaaccggcactggtgccgttcgatgcggctggcctcgccggtgca
gcggaaggcagcgacaccttgtggccgctggacctggcgctgccgggccacagtagcccc
gtgctggtgtccgtcgtctcgatgggcaacccgcatgccgtgcaggtggtcgacgatgtc
gacgcgcaagacctggaacaatcgggcccgctgatcgaacaccacccgcgctttccccgc
cgggtcaacgccggctatctgcagatcgtcgaccgccatcacgtgaaactgcgcgtgtat
gaacggggcgcgggagaaaccctggcgtgcggcacgggcgcctgcgccgccgccgtggcc
ggcatcctgcgcggccggctcgattccccggtgcgcatcagcgcgcgcggcggagaactg
tcgatcgcctggcaaggcccgggccagcctgtcctgatgacgggcccggccgtgaccgtg
ttcgaaggcacgatcgaactgtaa
DBGET
integrated database retrieval system