Janthinobacterium tructae: FJQ89_20565
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Entry
FJQ89_20565 CDS
T06359
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
jas
Janthinobacterium tructae
Pathway
jas02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
jas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FJQ89_20565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jas03021
]
FJQ89_20565
Transcription machinery [BR:
jas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FJQ89_20565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
PhyR_sigma-like
Sigma70_r4
Sigma70_ECF
HTH_28
HTH_38
HTH_17
TnsD
HTH_3
HTH_SB
HTH_7
GerE
HTH_40
HTH_11
HTH_24
Motif
Other DBs
NCBI-ProteinID:
QDG72544
UniProt:
A0A4Y6RJC1
LinkDB
All DBs
Position
4688064..4688582
Genome browser
AA seq
172 aa
AA seq
DB search
MTTAELALQQQVSSLYTDHHGWLRGLLRRKLGNAFDAADLAHDVYLHLMKTGRVPPAGES
RRHLTRIANGMVIDLYRRRQIEAAYLEVLAQVPEALAPSEEERALVLEALAEIDAVLHRL
PSKARQALLLCKLDGMSYRDIAAELQVSVSSVEKYIAAGLLACYQALHGQDA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccgccgagttagcgcttcagcagcaagtcagcagtctgtacaccgaccaccat
ggctggctgcggggcttgttgcgccgaaagctgggcaatgccttcgatgcggccgacctg
gcgcacgacgtgtacctgcacctgatgaagacgggccgcgtaccgccagccggggagtcg
cgccgtcacctgacgcggatcgccaatggcatggtcatcgacctgtaccgccgccgccag
atcgaagcggcttacctggaagtgctggcccaggtgcccgaagcgctggcgccgtccgag
gaagagcgcgccctggtactggaagcgctggcggaaatcgacgccgtgctgcatcggctg
ccgtccaaggcgcgccaggccttgctgctgtgcaaactcgacggtatgagttaccgcgac
atcgccgctgaactgcaagtctctgtttcgtccgttgaaaaatacatcgccgccggcttg
ctggcctgctaccaggccttgcatgggcaggatgcctga
DBGET
integrated database retrieval system
