Janthinobacterium tructae: FJQ89_23985
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Entry
FJQ89_23985 CDS
T06359
Symbol
sbcB
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
jas
Janthinobacterium tructae
Pathway
jas03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FJQ89_23985 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jas03400
]
FJQ89_23985 (sbcB)
Enzymes [BR:
jas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
FJQ89_23985 (sbcB)
DNA repair and recombination proteins [BR:
jas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FJQ89_23985 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FJQ89_23985 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FJQ89_23985 (sbcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
DUF7540
Motif
Other DBs
NCBI-ProteinID:
QDG73138
UniProt:
A0A4Y6RJD5
LinkDB
All DBs
Position
complement(5468435..5469883)
Genome browser
AA seq
482 aa
AA seq
DB search
MTTQTFLWHDYETFGAQPRRDRPAQFAAIRTDAELNEIGEPIMLYCQPANDFLPDPQACL
ITGITPQQCLQLGVPEHQFAATIEAAFSEPGTIGAGYNTIRFDDEVTRFLFWRNLIDPYA
REWKNHCGRWDILDVVRMTHALRPEGMQWPKRDDGQTSFKLEHLSKANGLLHEAAHDALS
DVRATIALARLIREKQPKLFEFCLALHKKDKVASEMGMHLAASERQPFLHVSGMFPAERG
CLGIVWPLATHPSNKNEILVWDCAYDPRELFSLDADTIRTRLFTRKEAMPEGMTRLPVKS
VHLNKSPMLVGNLKTLSPAMAAQWGIDVDAAKVNARLAATAPNMDAIWAEVFQRPGANVA
LDVDEDLYNGFVSNDDRRLLESLRRDTPAKLAAARPSFADERLQELLFRYRARNFPQTLS
EAESLRWEQHRAARLFDGDGNARTIEMLFTEIDVLSESVDERGEEILGELYDYAEMVAPM
RD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgactacccagactttcctttggcacgactacgaaacctttggcgcccagccgcgccgc
gaccgcccggcccagttcgcggccatccgcacggatgccgaactcaacgagatcggcgag
cccatcatgctgtattgccagcctgcaaatgatttcctgcccgacccgcaagcgtgcctg
atcaccggcatcacgccgcagcaatgcttgcagctgggcgtgccggagcaccagttcgcc
gccaccatcgaagcggccttttcggaaccgggcaccatcggcgcaggctacaacaccatc
cgtttcgacgatgaagtcacgcgtttcctgttctggcgcaacctgatcgacccgtatgcg
cgcgaatggaaaaaccactgcggccgctgggacatcctcgacgtggtgcgcatgacgcac
gcgctgcgccctgaaggcatgcaatggccgaagcgcgacgatggccagaccagttttaaa
ctggaacacctgagcaaggccaatggcctgctgcacgaagcggcgcacgatgcgctgtcc
gacgtgcgcgccaccatcgccctggcccgcctgatccgcgaaaagcagccgaaactgttc
gaattctgcctggccctgcacaagaaggacaaggtcgccagcgaaatgggcatgcacctg
gccgccagcgagcgccagcccttcctgcatgtgtcgggcatgttccccgccgaacgcggc
tgcctgggcatcgtctggccgctggccacgcacccgagcaataaaaatgaaattctcgtc
tgggattgcgcctacgacccgcgcgaactgttcagcctggacgccgacacgatccgcacg
cgtttgttcacgcgcaaggaagccatgccggaaggcatgacgcgcctgcccgtgaaaagc
gtgcacctgaacaagtcgcccatgctggtcggcaatttaaagaccctgtcgccggccatg
gccgcgcaatggggcatcgatgtggatgcggcgaaggtcaacgcccggctggccgccacg
gcgccgaacatggatgcgatctgggccgaagtgttccagcgcccgggcgcgaacgtcgcg
ctggacgtggatgaggatttgtacaacggtttcgtcagcaacgacgaccgccgcctgctc
gaatccttgcgccgcgacacgccggccaagctggccgcggcccgcccctcgtttgccgac
gagcgcctgcaggaattgctgttccgctaccgcgcccgcaatttcccgcaaaccctgagc
gaagcggaaagcctgcgctgggaacagcaccgcgccgcccggttgttcgacggcgacggc
aacgcccgcaccatcgagatgctgtttacggaaatcgacgtgctgtcggagtccgtggat
gagcggggagaagagatactgggcgagctgtacgattacgcggagatggtcgcgcccatg
cgcgactga
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