Janthinobacterium tructae: FJQ89_27800
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Entry
FJQ89_27800 CDS
T06359
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
jas
Janthinobacterium tructae
Brite
KEGG Orthology (KO) [BR:
jas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jas03400
]
FJQ89_27800 (sbcD)
DNA repair and recombination proteins [BR:
jas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FJQ89_27800 (sbcD)
Archaeal homologous recombinant proteins
FJQ89_27800 (sbcD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QDG73804
UniProt:
A0A4Y6RMY5
LinkDB
All DBs
Position
complement(6282957..6284183)
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AA seq
408 aa
AA seq
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MRLLHTSDWHLGQTLHNYERGYEHQRFLDWLLDTLVAERVDVLLVAGDVFDNANPSAASQ
KQLYVFLQQARARLPALQLIVVAGNHDSAGRLEAPAPLLAAHGTHVIGHLLRGENGDIDL
ERLLLPLSGADGRVQAWCLAVPFLRPGDVPKLPAGDTQDAYLGGIALLYRQLTDLALARR
QPGQAILAMGHCHMVGGEMSNDSERRIVIGGTEMLPSGIFDTAIAYAALGHLHKAQAVGG
QEHIRYCGSPIPLSFAEVNYRHQVLCLDIDGETLQSVRVIEVPRAVPLLRVPATPAPIAE
VLAQLAALDVPDAPAEAQPLLEVRVRLDAPEPGLRTRIETALDGKPVRLAKIETSSTARS
SAPENMTLDQLSQLQPDDIFRRLYQQKYAKEAPPELLSALAELLLPGA
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgctgcacacttccgactggcatctgggccagaccctgcacaactatgaacgg
ggctacgaacaccagcgcttcctcgactggctgctcgacacgctcgtggccgaacgcgtc
gacgtgctgctcgtcgctggcgacgtgttcgacaacgccaacccgtcggccgcctcgcaa
aagcagctgtacgtgttcctgcagcaggcgcgcgcgcgcctgcccgcgctgcagctgatc
gtcgtcgccggcaaccacgattcggccggccggctggaagcgcccgcccccctgctggcc
gcgcacggcacgcacgtgatcggccatttgctgcgcggcgagaatggcgacatcgacctg
gaacgcctgctgctgccactgtcgggcgccgatgggcgggtgcaggcctggtgcctggcc
gtgccctttttgcgtcccggcgacgtaccgaagctgcccgccggcgacacccaggatgcc
tacctgggcggcatcgccctgctgtaccgccagttgacggacctggcgctggcgcgccgc
cagcccggacaagccattcttgccatgggccactgccacatggtgggcggcgaaatgtcc
aacgattccgagcgccgcatcgtcatcggcggcaccgagatgctgccgtcggggatattt
gataccgccatcgcgtatgcggcgctgggccatttgcacaaggcgcaggccgtcggcggg
caagaacatatccgctattgcggcagcccgatccccctgtcgtttgccgaagtgaactac
cgccaccaggtgctgtgcctcgatatcgacggcgaaacgctgcagtcggtgcgcgtcatc
gaggtgccgcgcgccgtgcccctcttgcgcgtgcccgccacgccggcgccgatagccgaa
gtgctggcgcagctggccgccctcgacgtacctgacgcaccggccgaggcgcaaccgctc
ctggaagtgcgcgtgcgcctggacgcgcccgagccgggcctgcgcacgcgcatcgaaacg
gcgctcgacggcaagccggtgcgcctggcaaagatcgaaacctcgagcaccgcgcgcagc
agcgcgcccgagaacatgacgctcgaccaattgagccagctgcaacccgacgatatcttc
cgccgcctgtaccagcaaaaatacgccaaggaagcgccgcccgaactcctctcggcgctg
gccgaactgctgctgcccggcgcctga
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