Jatrophihabitans sp. GAS493: SAMN05892883_0090
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Entry
SAMN05892883_0090 CDS
T11165
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAMN05892883_0090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
jat03019
]
SAMN05892883_0090
03110 Chaperones and folding catalysts [BR:
jat03110
]
SAMN05892883_0090
03029 Mitochondrial biogenesis [BR:
jat03029
]
SAMN05892883_0090
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
jat04147
]
SAMN05892883_0090
Enzymes [BR:
jat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SAMN05892883_0090
Messenger RNA biogenesis [BR:
jat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SAMN05892883_0090
Chaperones and folding catalysts [BR:
jat03110
]
Heat shock proteins
HSP60 / Chaperonin
SAMN05892883_0090
Mitochondrial biogenesis [BR:
jat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SAMN05892883_0090
Exosome [BR:
jat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SAMN05892883_0090
Exosomal proteins of other body fluids (saliva and urine)
SAMN05892883_0090
Exosomal proteins of breast cancer cells
SAMN05892883_0090
Exosomal proteins of colorectal cancer cells
SAMN05892883_0090
Exosomal proteins of bladder cancer cells
SAMN05892883_0090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
UreE_C
Motif
Other DBs
NCBI-ProteinID:
SOD70384
UniProt:
A0A286EHW4
LinkDB
All DBs
Position
I:complement(107492..109138)
Genome browser
AA seq
548 aa
AA seq
DB search
MAKILSFDEDARRAMERGVDKLANAVKVTLGPKGRNVVLDKSFGPPVITNDGVTIAREIE
LTDPYENLGAQLAKSVATKTNDVAGDGTTTATVLAQALVNVGLRNVAAGANPTSLKRGID
AAVEAVSVALDKVATPVDGETEIAHVATISAQDPIIGALIGEAFTKVGKDGVITVEESNT
LETNLEFTEGMQFDKGYISPYFVTDAEAAETVLDDPYLLITTQKISSIADLLPLLEKVVA
ENKSLVIIAEDVDGEALSTLVVNSIRKTFVAVAVKAPFFGDRRKAFLQDLAIVTGAEVVA
PEIGLKLDSIGLDSLGRAGRVVVTKDTTTVTHGSGTSEAIADRVSQIRGEIENTDSDWDR
EKLLERLAKLAGGVGVIKVGGATEVEVKERKHRVEDAIAATRAAIEEGIVAGGGVALVHA
GAALDGDLGLTGDDATGVAIVRESLAQPLRWIASNAGEEGYVVVAKVRELPANNGFNAAT
GEYQDLLQAGVVDPVKVTKAALANAASVAGLILSTQSAIVEKPAESEASEDGHSHGGHSH
GHGHSHGH
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctcagttttgacgaggacgcccgccgcgcgatggagcgcggcgtcgac
aaactggccaacgcggtcaaggtcacgcttggcccgaagggccgcaacgtggtcctggac
aagtcgttcggcccgccggtcatcaccaacgacggcgtcacgatcgctcgcgagatcgag
ctgactgatccgtatgagaacctcggcgcccagctcgcgaagtcggtcgccaccaagacc
aacgacgtcgccggcgacggcaccaccaccgccaccgtgctggcccaggccctggtcaac
gtcggcctgcgcaacgtagccgccggcgccaacccgacctcgctcaagcgcggcatcgac
gcggccgtcgaggccgtctcggttgccctggacaaggtcgccaccccggtcgacggggag
accgagatcgcccacgtggccaccatctcggcccaggacccgatcatcggcgccctcatc
ggtgaggcgttcaccaaggttggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ctggagaccaacctcgagttcaccgagggcatgcagttcgacaagggctacatctcgccc
tacttcgtcactgacgcggaggcggccgagaccgtcctggacgacccgtacctcctcatc
accacgcagaagatctccagcatcgccgatctgctgccgctgctggagaaggtcgtcgcc
gagaacaagtcgctcgtcatcatcgccgaggacgtcgacggcgaggcgctctccacgctg
gtcgtcaactccatccgcaagacgttcgtcgcggttgccgtcaaggcgccgttcttcggt
gaccgccgcaaggcgttcctgcaggacctggcgatcgtcaccggagccgaggtcgtcgcc
cccgagatcgggctcaagctcgactcgatcggtctggactcactcggtcgcgcgggtcgc
gtcgtcgtcaccaaggacaccaccaccgtgacccacggttccggtacctccgaggcgatc
gccgaccgggtcagccagatccgtggcgagatcgagaacaccgactccgactgggaccgg
gagaagctcctcgagcgtctcgcgaagctcgccggcggcgtgggggtcatcaaggtcggt
ggcgccaccgaggttgaggtcaaggagcgcaagcaccgcgtcgaggacgcgatcgccgcg
actcgggccgcaatcgaagagggcatcgtcgccggcggaggtgtcgccctggtgcacgcg
ggggcagccctcgacggagacctcggcctgaccggggacgacgcgaccggtgttgccatc
gttcgtgagtcgctcgctcagccgctgcgttggatcgcctccaacgccggcgaagagggc
tacgtcgtcgtcgccaaggttcgcgaacttccggccaacaacggcttcaacgccgcgacc
ggcgagtaccaggacctgctgcaggccggcgtcgtcgacccggtgaaggtcaccaaggcc
gccctggccaacgcggcctcggtggccggactcatcctctccacccagagcgcgatcgtg
gagaagccggctgagtccgaggcgtccgaagatggccacagccacggtgggcacagccac
ggtcacgggcacagccacgggcactag
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