Jatrophihabitans sp. GAS493: SAMN05892883_0777
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Entry
SAMN05892883_0777 CDS
T11165
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
jat Jatrophihabitans sp. GAS493
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jat03032
]
SAMN05892883_0777
03400 DNA repair and recombination proteins [BR:
jat03400
]
SAMN05892883_0777
Enzymes [BR:
jat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SAMN05892883_0777
DNA replication proteins [BR:
jat03032
]
Prokaryotic type
DNA Topoisomerases
SAMN05892883_0777
DNA repair and recombination proteins [BR:
jat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SAMN05892883_0777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
PHP_C
DUF6306
Motif
Other DBs
NCBI-ProteinID:
SOD71215
UniProt:
A0A286EJV4
LinkDB
All DBs
Position
I:complement(840419..842971)
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AA seq
850 aa
AA seq
DB search
MTDTIDGPPTGASGDGPDGPDLPGSGTIAADDGGHDRIEPVDIQTEMQRSYIDYAMSVIV
GRALPDVRDGLKPVHRKILYGMYDSGFRPDRNYVKCGRVVGDVMGNYHPHGDTALYDALV
RMAQTWSLRYTMIDPQGNFGSPGNDPAAAYRYTECRLKPLAMEMLRDIDKDTVDFIPNYA
GNTTEPVILPARIPNLLVNGSEGIAVGMATRIPPHNLREVAAGVTWALDNPEATSEELLD
ALIARIQGPDFPTKGLIVGRSGIEDAYRTGRGSIRMRAVVEIEEDVKGRTILVVTELPYQ
VNPDNLVESIAMLAKDGKIAGIADINDESSDRIGMRIVVTVKRDAVARVVLNNLFKHTQL
QTTFGANMLAIVDGVPRTLRLDQFVSHYVEHQIEVIVRRTQYLLRKAEERIHILRGYLKA
LDQLDAVIALIRASASAEEARGGLMELLEIDEIQAVAILDMQLRRLAALERQRIIDEHDE
IAAEIDDYNDILAKPLRQRQIIRDEMNEIVEKYGDERRTVLVPFEGDVSMEDLIADEQVV
ITITRTGYAKRTKTDLYRAQKRGGKGVQGAALKTDDLVAHFFVASTHDWILFFTNKGRVY
RAKAYELPEANRNARGQHVANLLAFQPDETIADVITIRNYEVAPYLVLATKSGLVKKTKL
TDFNSNRTGGIVAVNLREDDELIDAALISADDDLLLVSRNAMSIRFKADDDTLRPMGRAT
SGVIGMRFSGEDVLLAMEVVNNEDVEILVATEGGFAKRTPVAEYPVQGRGGKGVLTARIV
STRGGLVGAAAVSPDDEIYAITSDGVVIRTKAAEVRRAQRQTMGVRLMNLPDGVNLLAVA
RNADEPDEQE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacaccatcgacggccccccgacaggcgcttcaggcgacggaccggacgggccg
gatctgccgggttcgggcaccatcgccgccgacgacggcggacacgaccgcatcgagccg
gtcgacatccagaccgagatgcagcgtagctacatcgactacgccatgtcggtcatcgtc
ggccgcgcgctgcccgatgttcgtgacgggctcaagccggtgcaccgcaagatcctgtac
ggcatgtacgactcgggtttccggccggaccgtaactacgtgaagtgcggccgggtcgtc
ggcgacgtgatgggtaactaccacccgcacggtgacaccgcgctctacgacgccctggtc
cggatggcgcagacctggtcactgcgctacacgatgatcgacccgcaggggaacttcgga
tcgccgggtaacgacccggccgccgcgtaccgctacaccgagtgccggctcaagccgctg
gccatggagatgctgcgcgacatcgacaaggacaccgtcgacttcatcccgaactacgcc
ggcaacaccaccgagccggtcatcctgccggcccgcattcccaacctgctggtcaacggc
agtgagggcatcgccgtcggtatggccacccgtatcccgccgcacaacctgcgcgaagta
gcggccggtgtgacctgggcgctggacaaccccgaggccaccagcgaggaactgctggat
gcgctcatcgcccgtatccagggtccggacttcccgaccaagggcctcatcgtcgggcgc
tccggaatcgaggacgcctaccgcaccggtcgcggctcgatccggatgcgcgcggtggtc
gagatcgaggaggacgtcaagggacgcaccatcctcgtcgtcaccgaactgccgtaccag
gtgaacccggacaacctcgtcgagtcgatcgcaatgctggcaaaagacgggaagatcgcc
ggcatcgccgacatcaacgacgagtccagcgaccgcatcggtatgcgcatcgtggtcaca
gtcaagcgtgacgcggtggcccgagttgtgctgaacaacctcttcaagcacacccagctg
cagaccaccttcggcgccaacatgctggcaattgttgatggtgtgccgcgcacgctgcgg
ctggaccagttcgtcagccactacgtcgagcatcagatcgaggtcatcgtccggcgcacg
cagtacctgctgcgcaaggcggaggagcgcatccacatcctgcgcggctacctcaaggca
cttgaccagctggacgcggtgatcgccttgatccgcgcctcggcctcagccgaggaggcc
cgcggtggcctgatggagctgctggagatcgacgagatccaggccgtcgccatcctcgac
atgcagctgcgtcgcctagccgccctcgagcgtcagcgcatcatcgacgagcacgacgag
atcgcggccgagatcgatgactacaacgacatcctggccaagccgctgcggcagcggcag
atcatccgcgacgagatgaacgagatcgttgagaagtacggcgacgagcggcgcacggtg
ctggtgcccttcgaaggcgacgtctcgatggaggatctcatcgccgacgagcaggtggtc
atcacgatcacccgcaccggctacgccaagcgcaccaagaccgacctctaccgcgcgcag
aagcgtggcggcaagggtgtgcagggagcggcgctgaagaccgacgatctggtcgcgcac
ttcttcgtcgcctccacccacgactggatcctcttcttcaccaacaagggtcgggtctac
cgggcgaaggcctacgaactgccggaggcgaaccgcaacgcccgcggccagcatgtggcg
aacctgctggccttccagccggatgagacgatcgccgacgtcatcacgatccgcaactac
gaggttgcgccgtacctggtgctggcgacgaagtccggtctggtgaagaagacgaagctc
accgacttcaactccaaccgcaccggcggcatcgtcgcggtaaacctgcgtgaggacgac
gaactgatcgacgcggcgctcatctcggccgacgacgacctgctgctggtgagccgtaac
gcgatgtcgattcggttcaaggcggacgacgacaccctgcgcccgatggggcgcgccacc
tccggggtcatcggcatgcggttctccggcgaggatgtgctgctggccatggaggttgtc
aacaacgaggacgtcgaaatcctcgtggcgaccgaaggtggcttcgccaagcggaccccg
gttgccgagtacccggtccaaggtcgaggcggaaagggcgttctcacagcgcgtatcgtc
tctactagaggcggcctggttggtgcggcggcggttagcccggacgatgagatctacgcg
atcacctcggacggcgtcgtcatccgcaccaaggcagcggaggtacggcgcgcacagcgt
cagacgatgggagttcgcctgatgaacctcccggacggcgtcaacctcttggctgttgcc
cgtaacgctgatgagccggacgagcaggagtaa
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