Jatrophihabitans sp. GAS493: SAMN05892883_0882
Help
Entry
SAMN05892883_0882 CDS
T11165
Name
(GenBank) RNA polymerase sigma-28 (SigD/FliA/WhiG) subunit
KO
K02405
RNA polymerase sigma factor FliA
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat02020
Two-component system
jat02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMN05892883_0882
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SAMN05892883_0882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jat03021
]
SAMN05892883_0882
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
jat02035
]
SAMN05892883_0882
Transcription machinery [BR:
jat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SAMN05892883_0882
Bacterial motility proteins [BR:
jat02035
]
Flagellar system
Flagellar assembly proteins
Stator
SAMN05892883_0882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Sigma70_r2
KORA
RM44_endonuclase
HTH_5
Motif
Other DBs
NCBI-ProteinID:
SOD71348
LinkDB
All DBs
Position
I:complement(955347..956258)
Genome browser
AA seq
303 aa
AA seq
DB search
MESHAPALARPSATEVDAMVTANLALVGHLVRETLGRVPAHVSRDELTSAGLFALVVSAQ
NFDDSRGVPFARFAAIRIRGALMDELRGLDWASRSVRGRARQADTVRAQLASTLGRSPKP
EEVAQAMGVTVAEVDSIDHDVQRASVLSLQGFAPNSGPELLSDAAVGPEALLVQREQIGY
LHDAIAELPERLRTVVEDYFFSERKMSDIAAELGVTESRVSQMRAEALKILRDGMSTAME
PADDELATARKTNARAEGSARQAAQRAAYATAVATRSTLSARLAMTNALGEVQGAPFGLA
QSG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtggaatcccacgcccccgcgcttgcacgtccgtccgcgactgaggtcgacgcgatggtc
accgccaacctcgctctggtcggtcacctggtccgcgagacccttggccgcgtccctgcc
catgtaagccgtgacgagctgacgtccgccggactcttcgccctcgtcgtgagcgcccag
aacttcgatgactcgcgcggcgtgcccttcgcacgcttcgctgcgatccgaatccgcggc
gcgctgatggatgaactgcgcggcctcgactgggccagccgctccgtccgtggccgggcc
cgccaggccgacaccgttcgggcccagctggcctccaccctgggccgcagcccgaagccg
gaggaggtcgcccaggcaatgggcgtcaccgtcgccgaggtcgactcgatcgaccacgac
gtacagcgtgcctccgtactcagcctgcagggcttcgctccgaacagcggaccggagctt
ctctccgacgccgccgtcggtccggaggctctgctcgtccagcgcgagcagatcggctac
ctgcacgacgcgatcgccgagctcccggagcgtctgcgcacggtcgtcgaggactacttc
ttctccgagcgcaagatgagcgacatcgccgccgagctcggggtcaccgagtcccgcgtc
tcgcagatgcgggccgaggccctgaagatcctgcgcgacgggatgtccaccgccatggag
ccggccgacgacgagctggccaccgcccgcaagaccaacgcccgcgccgagggcagtgcc
cgccaggccgcgcagcgcgccgcctacgccaccgccgtcgccacccgcagcaccctctcg
gcccggttggccatgaccaacgccctcggcgaggtccagggtgccccgttcggcctcgca
cagagtggctga
DBGET
integrated database retrieval system
