Jatrophihabitans sp. GAS493: SAMN05892883_1352
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Entry
SAMN05892883_1352 CDS
T11165
Name
(GenBank) CRP-like cAMP-binding protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat02020
Two-component system
jat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMN05892883_1352
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMN05892883_1352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jat03000
]
SAMN05892883_1352
Transcription factors [BR:
jat03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
SAMN05892883_1352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HTH_3
HVO_A0261_N
GntR
Crp
MarR_2
Sigma70_r4
HTH_24
HTH_26
HTH_IclR
HTH_ParB
HTH_31
HTH_29
HemN_C
Sigma70_r4_2
YfeC-like
DUF977
MarR
HTH_11
HTH_36
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
SOD71890
LinkDB
All DBs
Position
I:complement(1479911..1480585)
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AA seq
224 aa
AA seq
DB search
MDDILRRAGLFQGVDDDDAEALGSQFEIFDAARGTTLFHEGEPGDSLYIVLAGKVKLGRR
STDGRENLVAIMGPADEFGELSIFDPGPRTATAVVVTDARLARLPKSALQKWVNDRPEIA
LQLLRVVARRLRRTNTMLADLIFVDVPGRVAKQLLQLAQQFGSVDGGQLRVTHDLTQEEL
AQLVGASRETVNKALADFAQRGWLRLEGKSVVILDRERLARRAR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacattctgcgcagagcgggcctgttccaaggcgttgatgatgacgacgccgag
gcgctcggaagccagttcgagatcttcgacgcggcgcgcggcactaccctcttccacgaa
ggcgagccgggcgacagcctctacatcgtcctcgccggcaaggtaaagctcggacgccgc
tcgaccgacgggcgcgagaacctggtcgccatcatgggcccggctgacgagttcggcgag
ctctccatcttcgatcccggcccgcgcaccgcgacggccgtggtcgtcaccgacgcccgg
ctggcccgcctcccgaagtccgcgctgcagaagtgggtcaacgaccgtcccgagatcgcg
ctgcagctgctgcgcgtagtggctcgtcggctgcgccgcaccaacaccatgctggccgac
ctgatcttcgtcgacgtgccggggcgggtcgccaagcagttgctgcaactggcccagcag
ttcggctcggttgacggcggccagcttcgggtgacgcatgacctcactcaggaggagctg
gcgcaactcgtcggcgcctcccgagagaccgtcaacaaggcgctggccgacttcgcccag
cgcggttggctgcgcctggagggtaagagcgtcgtcatcctcgaccgcgagcgattggcc
cgccgcgcccgctaa
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