Jatrophihabitans sp. GAS493: SAMN05892883_1372
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Entry
SAMN05892883_1372 CDS
T11165
Name
(GenBank) uncharacterized protein DUF11
Organism
jat Jatrophihabitans sp. GAS493
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GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
CLIPPER
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
SOD71910
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All DBs
Position
I:complement(1497438..1501265)
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AA seq
1275 aa
AA seq
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MSQVASRRLLGGGAAFTLIAASVLLPPSSADAAPPVPSYATACAAPTRTISGGGSQSLQV
AVGEVVLLTGGTYTGGSNDFPSGAVLCVSANATLAPSYLNNAGGAVYNLGTATFPSAAVQ
GSFILENEGTASFPQGVNTNGPSTLENRGTLTVGTSISISGGAQLFNDGTVTVAGGVNLN
GGTVLANTGVITVNGDSTVNGVVANTGNITVTGRLTVNGGSTLTNSCRLTVGSDLTNGGA
LNNSGVISDLTGQLQNNGRLRQDPPGVTVGRDFGNDQSVTGYGRYRFSGTTKTQGTFVGD
SPSAPIVVQDLTPTAGRIFDTQNGTVANAVSGTVSDQLINAQPVDCAGATPSADLQVSKT
GQSTTSAGATVSYSVVATNAGPGTALGVIVQDLLPPNLVNPVASDGGVIASGVATWSIGS
MANGSTRTFTISGTAPATGQLTDHASGTTTSNDPISSNNDGSSPAASVTTVIVPAPPPNR
PPVIGNTSDSTVANVPLYRLLAFSDPDPGQVVQIEATTPPGFGTVQVSSDGSYRYVPQQD
FTGRDSFGVRACDNGSPQLCTAATVTVLVLPVASDSTQTIDQGTTLVMNVSANDIGTTGA
ATIVLPTTNGAITVLADGTVRYVPDPAFVGTDLFRYSVCSVQSADVCVSAQVTINVVALP
NRQPSAEDIALATQTGRTVSGRITATDPDASQTLTATLAAGPAAGSAVVQSDGTVAYTPS
GQFSGRDQFTVSFCDDGSPSKCAIGTVRVNVSPSAADDASTTKVDTPVSIEVGANDAGTV
GAPSIASSASHGTTTVEADHTITYRPANGYTGSDTFTYEICSVPDTDLCDTARVTVQVDA
LPNHAPVLGGQTQRTTVSVPVGGQLVGADADAGQSLTYSAASTPAHGTVTVSAAGAYTYT
ETDTFVGRDSFQVKVCDDATTPLCATATVSIDIFPIASAASTALNVNSVVTVVPSIVGDV
GAPSVATQPGHGTASATPGGILYTPDPGFVGLDSFTYSACDAASGTYCDSSLVALVVDPI
LINDAVTTLAGQKVVATVEANDIGTLGPPVIITPPANGSAVIGSSIDYTPTGAFTGHDTV
GYQRCSPVSPTVCGIATLSIRVLPDTRDDSASTVDGVPVTIDVNANDVGDAESATIFRPP
TNGDLTLESDGRITYTPTGGFIGTDSFTYQRCSLGADQLCSLAVVSIDITAAPPTPVPPT
PPAPTPIGPAPTPSFGVDPIAIGPDDGSPGTGGDDTLATTGPTAPIDALLEWALAFGVAG
LLALGSATVLRRRRR
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgcaggttgcatcgcgcaggcttctcggtggtggtgcggccttcacgctgatcgcc
gcttccgttctgctgcccccgagctcggccgatgccgcgccaccggtgcctagctacgcc
accgcctgcgcagcccccacgagaacgatctcaggcggggggtcgcagtcgctccaggta
gccgtcggcgaggtcgtactgctcaccggtggcacctacacgggcggatccaatgacttc
cccagcggcgccgtcctctgcgtttcggccaacgcgaccctggcccccagctatctgaac
aacgccggcggcgccgtctacaacctggggactgcgaccttcccctcggcggccgtccag
ggcagcttcatactggagaacgagggcacggcgtcatttccccagggcgtgaatacgaac
gggccgtccacgctggagaaccgggggacgctcaccgtcggtaccagcatctcgatctcc
ggcggtgcgcagctgttcaacgacggcacggtgaccgtcgccgggggcgtcaacctcaac
ggagggacggtgctcgccaacaccggcgtgattaccgtcaacggtgactccacggtgaac
ggggtggtcgccaataccggaaacataacggtgaccggccggttgacggtgaacggcggc
agcacgctgacgaactcatgccgtctcacggtgggctcggatctcaccaatggcggggcg
ctgaacaactccggcgtgatctctgacctgaccggacagctgcagaacaacggtcgacta
cgccaggacccgcctggcgtaacggtcggtcgcgacttcggcaacgaccagagcgtcacc
ggctacgggagataccggttctccggcaccacaaagacgcagggaaccttcgtcggcgac
tcgccgagcgcgcctatcgtcgtacaggacctcaccccgaccgccgggcgcatcttcgac
acccagaacggcaccgtggccaacgcggtcagcggaaccgtctccgaccagctcatcaat
gcccagccggtcgactgtgccggggcgacgcccagcgcagatctgcaggtcagcaagacc
gggcagagcacgaccagtgctggcgctacggtcagctatagcgtcgtagcgaccaacgcc
ggcccgggcactgcgctcggcgtgatcgtgcaggacctgcttccacccaacctggtcaac
ccggtggcctccgacggcggcgtcatcgccagcggggtagccacctggagcatcggatcg
atggccaacggcagcacccggaccttcaccatcagtggcacggcgcccgccaccggacaa
ctcaccgaccacgcgtcgggcaccaccaccagcaacgatccgatcagcagcaacaatgac
ggaagcagcccggccgcctcggtaaccacggtgattgtcccggcgcctccgcccaaccgg
ccgccggtgatcggcaacacttcggactcgacggttgccaacgtgccgctgtaccgactg
ctcgccttcagtgatccggatccggggcaggtggtccagatcgaagccaccacgccgcct
ggcttcggcacagtccaggtcagttctgacggctcctaccgttacgtaccgcagcaggac
ttcaccggacgggacagcttcggcgtccgggcctgcgacaacgggtcaccgcagctatgc
acggcggcgacggtgacggtcctcgtgctgccggtcgccagcgacagcacccagacgatc
gaccagggaaccaccctggtgatgaacgtgtcggccaacgacatcggaacgactggggca
gcgacgatcgtgcttcccacaacgaacggcgccatcaccgtgctggccgacggcaccgtg
cgatacgttccggacccggcgttcgtcggcaccgacctgttccgctactcggtctgcagt
gtgcagagcgcggacgtgtgcgttagtgcgcaggtgacgataaacgtggttgcgctgccc
aatcggcagccgtcggctgaggacatcgcgctggccacgcagaccgggcggacggtcagc
ggccggataactgccaccgatcccgacgccagccagaccctgacggcaacactggccgct
ggaccggccgccggctccgcggtcgtccagagcgatggaacagtcgcctacacaccgtcc
ggtcagttctccggtcgcgatcagttcacggtcagcttctgtgacgacgggagcccctcg
aagtgcgccatcggcacggtgcgggtcaatgtcagtccgagtgcggccgacgacgcctcc
accacgaaggtcgataccccggtgtcgatcgaagtcggtgcgaacgatgccggcacggtc
ggggcgccgtcgatagcaagctcggctagccacggaacgacgaccgtcgaggctgaccac
acgatcacctaccggcctgcgaatggctacacgggcagcgacactttcacctacgagatc
tgcagcgtccccgataccgacctctgcgacaccgcccgagtaaccgtgcaggttgacgcg
ctgcccaatcacgccccggtgctcggagggcagacccagcgcacgacggtcagcgtcccg
gtcggcggacaactcgtcggggccgacgccgacgccggtcagtcactgacctactcggcc
gcctcgacgccggcccatgggacggtgaccgtgtcggccgccggggcttacacgtacacc
gaaaccgacacgttcgtcgggcgggactcctttcaagtgaaggtctgcgacgacgcgacg
acaccgctctgcgcaacggcaacggtctccatcgacatctttccgatcgcgtcggcggct
agtacggccctgaacgtcaacagcgtcgtcaccgtcgtgccgagcattgtcggagacgtg
ggtgcaccgtctgtcgccacccagcccgggcatggcacggcgtcagcaactccgggtggg
attctctatacgccggatccgggattcgtcggactggacagcttcacctactcagcttgc
gatgcggccagcgggacctactgtgattcctcactggtcgctctggttgtcgatccgatt
ctgatcaacgacgctgtgaccacgctggccgggcagaaggtcgttgccaccgttgaggcg
aacgacatcggcacgctcggaccgccggtgatcatcaccccgccggcgaacggaagcgcc
gtgatcggcagctccatcgactacacacccaccggcgcattcaccgggcacgacacggtg
ggctaccagcgctgctcgccggtgagcccgaccgtctgcggcatcgcgaccttgtccatc
cgcgtgctgcccgacacccgcgacgattcggcctccacggtcgacggggtgccggtgacc
atcgacgtcaatgccaacgacgtcggcgacgccgaatcggcgacgatcttccgaccgccg
accaacggagacttgacgttggagtcggacggcagaatcacctacaccccgactggcggg
ttcatcgggacggatagtttcacctatcagcgttgcagtctcggtgccgatcagctctgt
tcgcttgccgtcgtctcgattgacatcaccgcagcccccccgacacccgttccgccgacc
ccacccgcaccgacaccgatcgggccggccccgacgccaagtttcggcgtcgacccgata
gccatcggaccggacgacggatcacccggcaccggaggcgacgacacgctcgccaccact
gggccaacggcgccgatcgatgcgctactggagtgggctctggcattcggggtggctggg
ctgctggccctgggaagcgcgaccgtgctcagacggcggcgccgctag
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