Jatrophihabitans sp. GAS493: SAMN05892883_1422
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Entry
SAMN05892883_1422 CDS
T11165
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat00020
Citrate cycle (TCA cycle)
jat00190
Oxidative phosphorylation
jat00650
Butanoate metabolism
jat00720
Other carbon fixation pathways
jat01100
Metabolic pathways
jat01110
Biosynthesis of secondary metabolites
jat01120
Microbial metabolism in diverse environments
jat01200
Carbon metabolism
Module
jat_M00009
Citrate cycle (TCA cycle, Krebs cycle)
jat_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
jat_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SAMN05892883_1422
00650 Butanoate metabolism
SAMN05892883_1422
09102 Energy metabolism
00190 Oxidative phosphorylation
SAMN05892883_1422
00720 Other carbon fixation pathways
SAMN05892883_1422
Enzymes [BR:
jat01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SAMN05892883_1422
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Thi4
Pyr_redox_2
FAD_binding_3
GIDA
Motif
Other DBs
NCBI-ProteinID:
SOD71963
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All DBs
Position
I:complement(1560533..1562278)
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AA seq
581 aa
AA seq
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MQEHSYDVVIVGAGGAGMRAALESSSRVRTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEVMCKEAIDAVLDLEKMGLPFNRTPEGRIDQRRFGGHT
RNHGESAVRRSCYAADRTGHMILQTLYQNCVKQGVEFYNEFYVLDLLLVDDAEGNPQAAG
VVAYELASGEIHVFKAKSVVFATGGVGKVFKTTTNAHTLTGDGMGVVYRKNLPLEDMEFY
QFHPTGLAGLGILLSEAARGEGAILRNSEGERFMERYAPTIKDLAPRDIVARSMASEVRE
GRGAGPNRDYVYLDLTHLEPAHIDAKLPDITEFARTYLGVEPYTEPVPVYPSAHYAMGGV
PTNIRAEVLRNNTDIVPGLYAAGEVACVSVHGSNRLGTNSLLDINVFGRRAGIAAAEHAV
ASQHLELPETPSAFVEGLISTLMNSTGSERVSTIRTELQATMDLNAQVYRTEESLKQAES
DIAALRERYVNVSIGDKGKRFNSDLLEAIELGFLLEIAEIMVVSAKARNESRGAHFREDY
PNRDDVNFMRHTMAYRQPDGSIALDYKPVVQTRYMPMERKY
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagagcattcatacgacgtagtcatcgtcggcgcgggtggcgcaggtatgcgcgcc
gccctggaatcttccagccgcgtgcgtacggccgtgctcaccaagctctaccccacccgc
tcgcacaccggtgccgctcagggcggcatgtgcgcagcgctggccaatgtcgaggaagac
aactgggagtggcacaccttcgacaccgtcaaaggcggcgactacctcgtcgaccaggac
gcggccgaggtgatgtgcaaggaggccatcgacgctgtcctcgacctggagaagatgggg
ctgccgttcaaccgcacgccggaggggcgcatcgaccagcgccgattcggcggccacacc
cgcaaccacggtgagtccgcggtgcgccgctcctgctacgccgccgaccgcaccgggcac
atgatcctgcagacgctctaccagaactgcgtgaagcagggcgtcgagttctacaacgag
ttctacgtcctcgacctgctgctggtcgacgacgccgagggcaacccgcaggcggccggc
gtcgtggcctacgagctggccagcggcgagatccacgtcttcaaggcgaagtcggtggtc
ttcgcgaccggcggcgtcggcaaggtcttcaagaccacgacgaacgcacacaccctcacc
ggtgacggcatgggcgtggtgtaccgcaagaacctgccgctggaggacatggagttctac
cagttccacccgacgggtctggccgggctgggcatcctgctcagcgaggcggcccgcggc
gagggcgccatcctgcgcaactccgaaggtgagcgcttcatggagcgctacgccccgacg
atcaaggacctggcaccgcgcgacatcgtcgcccggtcgatggccagcgaggtgcgcgag
ggtcgcggtgccggcccgaaccgcgactacgtctacctcgacctcacccacctggagccc
gcgcacatcgacgcgaagctgccggacatcaccgagttcgcccgtacttacctcggtgtt
gagccctacaccgagccggtgccggtctaccccagcgcgcactacgcgatgggcggcgtg
ccgaccaacatccgggccgaggtgctgcgcaacaacaccgatatcgtccccggcctctac
gccgccggcgaggtggcctgtgtctcggtgcacggctcgaaccggctgggcaccaactcg
ctgctggacatcaacgtcttcggccgccgggccggcatcgcggccgccgagcacgccgtg
gccagccagcacctcgaactgcccgagacgccatcggctttcgtcgagggcctcatcagc
accctgatgaactcgaccggcagcgagcgggtctccacgatccgcaccgaactgcaggcc
accatggacctcaatgcgcaggtgtaccgcaccgaggagtcactgaagcaggctgaatcc
gacatcgcggcgctgcgcgagcggtacgtcaacgtctcgatcggagacaagggcaagcgc
ttcaactccgacctgctggaggccatcgaactcggcttcctgctcgagatcgccgagatc
atggtcgtctcggccaaggcccgcaacgagtcgcgcggggcgcacttccgcgaggactac
ccgaaccgcgacgacgtgaacttcatgcggcacacgatggcctaccgccagcccgacggc
agcatcgcccttgattacaagccggtcgtgcagacccggtacatgccgatggagcgcaag
tactag
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