Jatrophihabitans sp. GAS493: SAMN05892883_1813
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Entry
SAMN05892883_1813 CDS
T11165
Name
(GenBank) geranylgeranyl diphosphate synthase type I
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat00900
Terpenoid backbone biosynthesis
jat01100
Metabolic pathways
jat01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SAMN05892883_1813
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
SAMN05892883_1813
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
jat01006
]
SAMN05892883_1813
Enzymes [BR:
jat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SAMN05892883_1813
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SAMN05892883_1813
2.5.1.29 geranylgeranyl diphosphate synthase
SAMN05892883_1813
Prenyltransferases [BR:
jat01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SAMN05892883_1813
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
SOD72416
LinkDB
All DBs
Position
I:1995064..1996092
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AA seq
342 aa
AA seq
DB search
MTSRADTHPALLVIERARELVEPAMRAAIATLRDDQMRLISSYQMGWQEADGSAACGGGK
ALRPTLAVISAVAGGGSARDGVPGGIAVELVHNFSLIHDDVMDRDVERRHRPTAWTVFGD
GQAILAGNAMLTVAFDVLIADAAAGMRALPCLTHSIHELISGQSRDLAYEGAEHIDLDAC
LQMEAGKTAALISASASIGALAAGASEEVVSGLAGYGFELGMAFQLVDDILGIVGDPKIT
GKSSSSDVRAGKRSAPVVAALGADGDAARQLGALLQYGPPSEEADVERATALIAAAGGLS
WASDEADARLRKALAHLDGLPLEATAAEDLRTLARYVVDRDH
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgacctcgcgcgctgacactcatccggcgctgctggtcatcgaacgggcccgagagttg
gtcgagccggccatgcgggccgccatcgccacgctgcgcgatgaccagatgcggctcatc
tccagctatcagatggggtggcaggaggccgacggctcagcggcgtgcggcggcggcaag
gcgctgcgaccgacattggcggtcatctcggccgtggccgggggaggctcggcccgtgat
ggcgtgccgggtggcatcgcggtcgagttggtacacaacttctccctcatccatgacgac
gtgatggatcgagacgtcgagcgtcgccatcgcccgaccgcctggacggtcttcggtgac
ggacaggcgattctggccggcaacgcgatgctgaccgtggccttcgacgtcctcatcgcc
gacgcggcggccggcatgcgcgccctgccgtgcctcacccactcgattcacgagctgatc
agtgggcagtcccgtgatctcgcctacgagggtgccgaacacatcgatctcgatgcgtgc
ctgcagatggaggcgggtaagacggcggccctgatcagtgcctcggcctctatcggcgcg
ctggccgccggggcgagcgaggaagtggtcagcgggctggctggctacggattcgagctg
gggatggcctttcagctcgtcgatgacatcctcgggatcgtcggcgacccgaagatcacc
ggcaagtcgtcgtcctctgacgtccgggccggcaaacgcagcgcgcccgtggtcgccgcg
ctgggcgccgacggcgacgccgcccgtcagctgggagcactgctgcagtacggtccgccg
agcgaggaggccgacgtcgagcgggcgacggcgttgatcgcggccgccggcggcctgagc
tgggcctccgatgaagccgacgcgcggttgcgcaaggcactggcccacctggacggcctg
ccgctggaggcgaccgcggccgaggaccttcgcaccctcgcccgctacgtggtcgaccgc
gaccactag
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