Jatrophihabitans sp. GAS493: SAMN05892883_1848
Help
Entry
SAMN05892883_1848 CDS
T11165
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAMN05892883_1848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jat03021
]
SAMN05892883_1848
03400 DNA repair and recombination proteins [BR:
jat03400
]
SAMN05892883_1848
Enzymes [BR:
jat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAMN05892883_1848
Transcription machinery [BR:
jat03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAMN05892883_1848
DNA repair and recombination proteins [BR:
jat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAMN05892883_1848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
SOD72455
LinkDB
All DBs
Position
I:2017346..2018386
Genome browser
AA seq
346 aa
AA seq
DB search
MLISQRPSLTEETIAENRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVEGVKEDVTDIILNLKELVVSSDSDEPVVMYLRKQGPGEVTAADIAPPTGVVVHN
PDLKIATINKKGRLEIELVVERGRGYVTAVQNKQPGQEIGRIPVDSIYSPVLKVTYGVEA
TRVEQRTDFDRLVVDVETKFSLTPRDAVASAGHTLVELFGLFRELNDEAEGIDVGPSPSE
VADIAAFSMPIEELDLTVRSYNCLKREGIHNVGELVGRSEADLLDIRNFGQKSIDEVKVK
LAGLGLALKDSPPGFELSHAVSSYGDESTDETTADDDVDFAETEQL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttgctgatttcccagcgcccgtccctgacggaagagaccatcgccgaaaaccgctcgcgg
ttcatcatcgagccgctcgagcccggtttcggctacaccctcggtaattcgcttcgccgt
accctgctcagctcgatcccgggcgcggccgtcaccagcatccgcatcgacggtgtgctg
cacgagttcaccaccgtcgaaggcgtcaaagaggacgtcaccgacatcatcctgaacctg
aaggaactggtcgtctccagcgactccgacgagccggtcgtcatgtacctgcgcaagcag
ggtccgggcgaggtcaccgccgccgacatcgctccgccgaccggggtcgtcgtgcacaac
cccgacctgaagatcgccacgatcaacaagaagggtcgcctggagatcgagctcgtcgtc
gagcgtggccgcggctacgtcaccgcagtgcagaacaagcagcccggccaggagatcggc
cgcattccggtcgactcgatctactccccggtcctcaaggtcacctacggcgtcgaggcc
acccgcgttgagcagcgcaccgacttcgaccgcctggtcgtcgacgtcgagacgaagttc
tcgctcaccccgcgcgacgccgtcgcctcggccgggcacaccctggtcgagctcttcggt
ctcttccgcgagctgaacgacgaggccgagggcatcgacgtcggaccgtcgccgtccgag
gtcgccgacatcgcggccttctcgatgccgatcgaggagctcgacctcacggtccgctcc
tacaactgcctcaagcgcgagggcatccacaacgtgggtgagctcgtcgggcgcagtgag
gccgatctgctcgacatccgtaacttcggacagaagtcgatcgacgaggtcaaggtcaag
ctcgcaggtctgggcttggcgctcaaggacagcccgcccggattcgagctcagccacgct
gtctcctcctacggggacgagagcactgacgaaaccaccgctgacgacgacgtcgacttc
gcggaaaccgaacagctttaa
DBGET
integrated database retrieval system
