Jatrophihabitans sp. GAS493: SAMN05892883_1850
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Entry
SAMN05892883_1850 CDS
T11165
Name
(GenBank) tRNA pseudouridine(38-40) synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
jat Jatrophihabitans sp. GAS493
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jat03016
]
SAMN05892883_1850
Enzymes [BR:
jat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SAMN05892883_1850
Transfer RNA biogenesis [BR:
jat03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAMN05892883_1850
Prokaryotic type
SAMN05892883_1850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
SOD72458
LinkDB
All DBs
Position
I:2019187..2020104
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AA seq
305 aa
AA seq
DB search
MTDAEAEVAGGGPSLDVSVSGARSGPGAVPDPTVRVRLDLGYDGAQFSGWAVQRDRRTVQ
GELQAALARILRLDAVTLTVAGRTDAGVHATGQVCHFDVAALLWSEQEPMLLRRLGGVLA
PDVRVHSARVVPADFDARFSALWRHYRYRISDLPGGGDPLRRGFVLNWRRPLDTDLMQLA
ATQILGLRDFAAFCKFRPEATSIRTMQHFTVQRSAGGEIVCELRADAFCHSMVRSLVGAL
ITVGEGRRDPDWPASLLTRSTRADDVPVVAPHGLVLCEVGYPADDELAARSAVTRNRRDD
ATAAG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgcagaagctgaggtcgccggcggaggtccgtcgctcgacgtttctgtctcc
ggcgctcgctcagggccgggcgcggttcccgatcccactgtgcgggtgcggctggacctc
ggctatgacggtgcccagttctccggctgggccgtccagcgcgaccggcgaaccgtgcag
ggagaactgcaggcggcgctggccaggatcctgcgcctggacgcggtcaccctgacggtg
gccggccgcaccgacgccggcgtgcacgccaccggccaggtctgtcacttcgacgtggcg
gccctgctctggtcggagcaggagccgatgctgctgcgccgacttggcggggtgctcgca
ccggacgtgcgggtgcactcggcccgggtcgtcccggccgacttcgacgcccgcttctca
gcgctgtggcggcactaccggtatcggatcagcgacctccccggtgggggcgatccgctg
cgccgcggcttcgtgctgaactggcggcgcccgctggacaccgatctcatgcagctcgcc
gcgacgcagatcctcggtctgcgcgacttcgccgccttctgcaagttccgcccggaggcg
acatcgattcgcaccatgcagcacttcaccgtgcagcgatcggccggcggcgagatcgtc
tgcgaactgcgggccgacgccttctgccactccatggtgcggtcactggtcggtgcgctc
atcacagtgggggaggggcggcgtgaccccgactggccggcttcgctgctgacccggagc
acccgggccgacgacgttccggtggtcgccccccatggcctggtgctctgcgaggtcggc
tacccggccgacgatgagctggccgcccgcagcgccgtcacccgcaaccgtcgcgatgat
gcgacggccgcgggttag
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