Jatrophihabitans sp. GAS493: SAMN05892883_2215
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Entry
SAMN05892883_2215 CDS
T11165
Name
(GenBank) RHS repeat-associated protein
Organism
jat Jatrophihabitans sp. GAS493
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6443
Motif
Other DBs
NCBI-ProteinID:
SOD72899
UniProt:
A0A286EQ12
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All DBs
Position
I:2356114..2361678
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AA seq
1854 aa
AA seq
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MSLAVGVEAAVQLHNAAPAAADASTGTAGTFVPLPPGRILNTLAPVNKLVASTWRNVQIT
GVVNVPSTGVSAVAVTLTVSNYATTGLLYAVPQAAAPVTPPVVLVNYNYTTTGPPTMNSA
IVALNQSNGQISVEATTAADLIIDVQGYYTASSGGSGTAPGGYVPVAQTRIGSTTTGSVN
FSPSTVGKIANGSDLIVTVPTSVVPTGASSVFANITATSYATTDSHYLTPYLPTGTPGVG
SLNIMPNVTTSIGAAIDISDTTRQFVLRVNGAGAAIDISVDIEGYFAAAAPSGSFTPGVA
RVFDSRAGAAVLAGATTTVQVAGVAGVPVAGSGIEAVAANLTVISPTAAGSLVAYADDQS
APAGLASLTFSTAGGAHGNLMNVQLGADGGIKVTNNSTGTLHFLIDLEGWYQGGQVIANG
QIRTERAVTLHPTQVSSNVTGVQYRYRIGALPATAFTDVPNTSLSLVGGAGGATPAPGPV
SATASYLWDLSTTSALGTPLSDTLVQVEGCFTVTGSSTVVCSPPQDLMYTAAFDDSHATT
DAGPGTVSLQNGDYRVSATDVDVTAYLGDLTVNRSLTTLYPAAENADTTGQLNQAGVFGP
GWTAGLPQPDAGAADVTISAPANSGYVNLQYSDGSVDTYQQTSASATYPITFVPINDATQ
TGALLTRTNANTLVLNDADGTITTWKQASPTSPWLVDTVVQPGTGGTTTSYARSAISGIG
IAAGTLVTRIIAAALNPATACTDTNADTNTACRSLILKYSTAPGTTNLIRLTEVDLSAYD
PGKSGGAGMNIIAIAKYDYQSGTGLLLDEYDPRLSNPLKTAYTYQSGAPLRLTTVSPPGM
TATPWTISYDATGRVSTVSRPDPTISGTPTATTTMVYSVPVTGSGAPIDLGGTATAAWGQ
LSDLPYTATAVFGPTKVPSSTTASSIGSTEWPWSTITYIDPNGQVTNSASYGAGAWQYGA
DQYDTNGNLVASLTPANRRNTVSNPYPVGSLLQAASVADRAALLSTVNIYSPTHPSELTD
TFSPTHPMRNGGGSLTYNGRDHTATTFDTGAPAITTVGQPDYQLPTSTATSPFNADSGTD
VAAEQRITVLGYADVLPDTTTAGAVPLGWLLHKATTSTVQMGSSPSTADLVTKTRYNAAG
QVIETRLPADTTTTGTTAATTQTSYYTPGTTNPASCLSNAWAGMVCKTKPADSTGNPLPT
KSVTAYDMYFNTTTSTEVGTNTGGTLTRTTATTFDAVERETTQQVSINGDTTTAPLITYN
YDTGATAKGLLLSTTMTVGGTVTQTLSNTYDALGRRYRYADANFNVSVTAYDIAGRVRYF
SNGDLGTTYVYDDTAGTEHRGLVTSQGVTGDATTSFSATYDADGTMATQTYPNGIVATTT
YDEAGNETSLSYDKAGSNWLAFTQTSGADGRVVNQTSSGGGTGITSQIFNYDLAGRLTRV
RDTTTGAECTTRAYGFNANSDRTGYSTITGASGAACPTAATLGTTTFDTSDRITTTGYAY
DGLGRTLTVPAADTNGTGTHTGTTGTATIAYYDNDMVKTETQTTPTSTTLAYGLDPDQNR
ITTISDGTTNYYSDDSDSPAWAETSPTTYDSYLRGIDGSMAGTITHDTTAGTTTAVVDLV
NMQGSIVANAPDTAAATGLTPGSYKETTEYGLPRTDLNTSLAQADLNAVTPYGWLGSKQR
SNDSLAGLTLMGVRLYNPMTGRFLSTDPVPGGNANAYTYPVDPINQMDLTGQCFWDLCIG
ESIGVAEVGILLLGALGVGKAAQNAAKHPISIGSTTYVGRSKVSANACGNGNGNVACANR
KKTPARNANATGHKPQKQSKGKTRGDDHENRQGHGGRQKPNFTPNPNKPRPERY
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggcggtcggggtggaggctgcggtgcagctgcacaacgcagctccagcggca
gcggatgcgtcaaccggcacagcggggacgttcgttccgttgccgcccggtcgcattctg
aatacgttggcgccggtaaataagctggtggcatcgacgtggcgcaacgtccagattacg
ggtgttgtgaatgtgccgtcgactggggtgtcggcggtggcggtgacgctcacggtctcc
aactacgccacgacgggtctgctgtatgccgttccgcaagcagcggcaccggttactccg
ccggtggtcctggtgaactacaactacaccaccacaggcccgccgacgatgaactccgcg
atcgttgcgttgaaccagtcgaacggccagatatcggtcgaggcgacaacggcggccgat
ctgatcattgatgtgcaggggtattacacggcgtcctccggcgggagcgggaccgcaccg
ggcgggtacgtgccggtcgctcagacccgaatcggaagcacgacgacgggcagcgtgaac
ttcagcccgtccacggtcggcaagattgccaatggttctgacctcatcgtgaccgtcccg
acgagcgtcgtcccgaccggagcgtcctcggtgttcgcgaacatcacggccacgagctac
gcgacgaccgattcgcattacctcacgccgtacctgccgaccggcacccccggtgttggg
tcgctgaatatcatgccgaacgtcaccacgtcgatcggcgccgcgatcgacattagcgac
acaacacggcagttcgtgttgcgggtgaacggtgcaggagcagcaatcgatatctccgtt
gacatcgagggttacttcgctgcggcggcgccgtctgggtcgttcaccccgggcgtagcg
cgagtgttcgacagccgggcaggagctgcggtactcgccggcgcaactaccacggtgcag
gtagctggtgtggctggagtcccggtggccgggtccggtatcgaggcggtagcggcaaac
ctcaccgtcatcagccccaccgcagcgggatcactggtcgcctacgccgatgaccagtcc
gccccggccggcctcgcgtcgttgacgttcagcactgcaggtggtgcgcacggcaacctg
atgaacgtgcaactcggcgccgacggcggtatcaaggtgacgaataacagcaccggtacg
cttcatttcctcatcgacctggagggttggtatcagggcggccaggtcatcgccaacggc
cagatccgcaccgaacgagcagtgactctgcacccgacgcaggtcagcagcaacgtcacg
ggcgtgcagtaccgctaccgcatcggagctctgccggcgacggcgtttaccgatgtgccg
aacaccagcctgtcactcgtcggcggcgccggcggtgcgacaccggcaccgggcccggtg
tcagccactgcgtcctacctctgggatctatcgacaacgtcagcacttggcacaccgctc
agcgacacgctggtgcaggtcgaagggtgcttcaccgtcaccgggtcctcgacggtggtc
tgctccccaccgcaggacctgatgtacacggccgcgttcgacgactcccacgccaccacc
gacgccgggccggggacggtgtcgctgcagaacggtgactaccgtgtctccgccaccgac
gtcgacgtcaccgcctacctcggtgacctgaccgtcaaccgcagcctcaccacgttgtac
ccggcggcggagaacgcggacaccaccggtcagctcaaccaggccggtgtcttcggtccg
ggctggaccgcggggcttccgcagcctgacgctggtgcagcggacgtcaccatcagcgcg
ccggccaactccgggtatgtgaacctgcagtactccgacgggtcggtcgacacctaccag
cagacctcagcatcagcgacctacccgatcacgttcgtgccgatcaatgacgccacccaa
accggggccctgctgacccgcaccaacgccaacaccctcgtcctcaacgacgccgacggc
acgatcaccacctggaaacaagcctccccgacctcgccgtggctggtggacaccgtggta
cagccaggcaccggcggcaccacgaccagctacgcccggtccgctatctccggaatcggc
atcgcggccggaaccttggtcacgcggatcatcgcggccgcgttgaacccggccacagcc
tgcaccgacacgaacgcggacaccaacaccgcatgccgcagcctcatcctgaagtacagc
accgcaccgggcacgacgaatctgatccgcctgaccgaggtcgacctctccgcctacgac
ccgggcaagtccggcggtgcggggatgaacatcatcgcgatcgcgaagtatgactaccag
tccggcaccgggttgttgttggacgagtacgacccgcggctgagcaacccgctgaaaacc
gcgtacacctaccaaagcggcgcaccgttgcgattgacgacggtcagcccgccgggaatg
acggccacgccgtggacgatctcctatgacgccactgggcgggtgtcgacggtgtcacgc
cccgacccgacgatctccggcaccccgacggcgacgaccaccatggtctacagcgttcca
gtcaccggcagcggcgcaccgatcgatctcggcggcactgccaccgcggcctggggacag
ctctcggacttgccctacacggcaaccgctgtgttcgggccgacgaaggtcccgtcctcc
acgaccgcgtcctcgatcggatccacggaatggccctggtccaccatcacctacatcgac
ccgaacgggcaggtcaccaactccgcctcctacggtgctggtgcgtggcaatacggcgcc
gaccagtacgacaccaacggcaacctcgtcgcctccctcacccccgcgaaccggcgcaac
accgtcagcaacccctacccggtaggcagtctcctgcaggccgcgtcggtcgcggaccgg
gcggcgcttctgtcgacggtgaacatctattcaccgacccacccgtcagagctgaccgat
accttcagcccgacacatccgatgcgtaacggcggcggatcattgacctacaacggtcgt
gatcacaccgcgacgaccttcgacaccggagcaccggcgatcaccacggtcggtcagccg
gactatcagctgccgaccagcaccgcgacgtcaccgttcaacgccgacagcggcaccgac
gtagccgcggaacagcggatcaccgtcctgggctacgccgacgtgctgcccgacaccacc
accgccggtgcggtgccgctcgggtggctgctgcacaaagccaccactagcaccgtgcag
atgggcagctccccatcaacggcggatctggtgacgaagacccggtacaacgcggccggg
caggtcatcgaaacccgcctacccgccgacaccaccaccaccggcaccaccgcagccacc
acccagacgtcctactacacaccgggaacaaccaaccccgcctcatgcctctccaacgcc
tgggctggaatggtgtgcaaaacgaaaccggccgacagcaccggaaaccccttgccgacc
aaatcggtcaccgcgtacgacatgtacttcaacaccacaacctcgaccgaggtcggaacc
aataccggtgggacgttgactcgcacgaccgccacgacgtttgacgcggtggaacgggag
accactcagcaggtcagcatcaacggcgacaccaccaccgcaccgttgatcacctacaac
tacgacaccggggccaccgccaagggcctgctgctgtccaccaccatgacagtcggcggc
accgtcacccagaccctgagcaacacctacgacgccctgggacgccgctaccgctacgct
gatgcgaacttcaacgtctcggtcaccgcctacgacatcgccgggcgggtgcggtacttc
tccaacggcgatctcggcaccacctacgtctacgacgacaccgccggcaccgaacaccgc
gggctggtcaccagccagggcgtcaccggagatgccacgaccagcttctccgccacctac
gacgctgacgggacaatggccacccagacctaccccaacggcatcgtcgccaccaccacc
tacgacgaagccggcaacgaaacatcgctgagctacgacaaagccggttccaactggtta
gcgttcacccagaccagcggcgccgacggtcgcgtagtaaaccagaccagcagcggcggc
ggcaccggcatcacgtcccagatattcaactacgacctcgccgggcgcctaaccagggtt
cgcgacactaccaccggcgccgaatgcaccacccgcgcgtacggattcaacgccaactcc
gaccgcaccggctactccaccatcaccggcgcgtccggagccgcctgccccaccgccgca
accctcggaacgaccaccttcgacacatccgaccgcattaccaccaccgggtacgcctac
gacgggctcggccgcaccctcaccgtccccgccgccgacaccaacggcaccggcacccac
acgggcaccaccggtaccgcgaccatcgcctactacgacaacgacatggtcaaaaccgaa
acccaaaccaccccgacgagcaccaccctcgcctacggcctggaccccgaccagaaccgc
atcaccaccatcagtgacggcaccaccaactactacagcgacgacagcgacagcccagcc
tgggccgaaaccagccccaccacctacgacagctacctccgcggcatcgacggctccatg
gccggcaccatcacccacgacaccaccgccggaaccaccaccgccgtcgtcgacctcgtc
aacatgcaaggcagcatcgtcgccaatgcgcccgacaccgcggcggctaccggcctcacg
ccgggttcgtacaaggagaccaccgaatacgggctaccgcgtactgacctcaacaccagc
ctcgcccaggccgacctcaacgccgtcacgccctacggctggctcggcagcaaacaacgc
tccaacgactccctcgcaggcctcaccctcatgggtgttcggctgtacaaccccatgacc
ggacgattcctctccaccgaccccgtccccggcggaaacgcgaacgcgtacacctacccc
gtcgaccccatcaaccaaatggacctcacaggccagtgtttctgggacctttgtatcggt
gagtcgatcggtgtcgccgaagtgggtatcctactcctcggagcattaggggttggcaag
gccgctcagaacgctgcgaagcatccaatcagcatcggctctactacctacgtgggtaga
agcaaggtgtctgcaaacgcctgcggaaatggcaatgggaacgttgcctgtgcgaacagg
aaaaagacgcctgcgcgaaatgccaacgcaacaggacacaaacctcagaagcaatcgaaa
ggaaaaaccaggggcgacgaccacgagaatcgacaagggcacggtggtcgacagaagccg
aactttacgccgaacccgaataagccacgacccgagagatactga
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