Jatrophihabitans sp. GAS493: SAMN05892883_2406
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Entry
SAMN05892883_2406 CDS
T11165
Name
(GenBank) TetR family transcriptional regulator
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
jat Jatrophihabitans sp. GAS493
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
jat03000
]
SAMN05892883_2406
Transcription factors [BR:
jat03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SAMN05892883_2406
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Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_13
TetR_C_13_2
TetR_N
TetR_C_11
TetR_C_6
EthR_C
TFIID-31kDa
Motif
Other DBs
NCBI-ProteinID:
SOD73114
LinkDB
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Position
I:complement(2554441..2555046)
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AA seq
201 aa
AA seq
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MVNETRERPKLTAKGQRVRARIVEEAAALIHERGVVATTLEDVKVAAEVSGSQLYHYFPD
KDDLVQAVIDYNADAIVSRNRQALGSANGVEAWQKMVITAAKRTKAKGGCALGSLVGQLA
ESDSEARALIASGFDQWAAAISDGLRSLHAEGKLPSDIDPDDLAITLLAALQGGLLLAQA
QRNTRPFETAVNTLLALIIGR
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacgagacacgtgagcggccgaagctcaccgcgaaaggccagcgcgtccgcgca
cgaatcgtggaagaggctgccgctttgatccacgagcgcggagtcgtggcgaccaccttg
gaagacgtcaaggtggcagcggaagtcagcggctcgcagctgtaccactacttccccgac
aaggacgacctcgtgcaggcggtcatcgactacaacgccgacgccatcgtcagtcgcaac
cggcaggccctaggcagcgcgaacggagtcgaggcttggcagaagatggtaatcaccgcc
gcgaagcgcaccaaggcgaagggcggctgcgcactcggctcgctcgttggtcaactcgcc
gagagcgactccgaggcgcgagcgctcattgcgtccgggttcgaccagtgggcagccgcc
atcagcgatggactgcgatccctacacgccgaggggaaactcccgtccgacattgatccg
gacgacctcgccattaccctgctcgccgcgctccaaggaggtcttctactggcccaggcg
cagcggaacacccgcccgttcgaaaccgcggtcaataccctcctcgcactcatcatcggc
agataa
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