Jatrophihabitans sp. GAS493: SAMN05892883_2468
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Entry
SAMN05892883_2468 CDS
T11165
Name
(GenBank) DNA helicase-2/ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat03420
Nucleotide excision repair
jat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SAMN05892883_2468
03430 Mismatch repair
SAMN05892883_2468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jat03400
]
SAMN05892883_2468
Enzymes [BR:
jat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMN05892883_2468
DNA repair and recombination proteins [BR:
jat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SAMN05892883_2468
MMR (mismatch excision repair)
Other MMR factors
SAMN05892883_2468
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
SOD73179
UniProt:
A0A286EQU2
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Position
I:2612665..2615961
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AA seq
1098 aa
AA seq
DB search
MTTQIAVSARQLAGLLGLPAPSEEQIAVIESPLEPGVVIAGAGSGKTETMSTRVVWLIAN
RLVSPDQVLGLTFTRKAAAELSRRIRRRLAQWRMVLEHETPEESEAIAALISGEPTVLTY
AAYAGRLAGEHAMRLGSEPSPQLLSPAMRWQLADGVVRRFTGEVPVAAGVLSTVVNQVLD
LADQLSDHLRSPAELEEYSRQDLACFEALPLGKGARAVEYPGDSKKFIDATVVRRALVPL
LQEFARAKAARQVSDFGDQMVLAARLAELPDVSQIERDRFRVVLLDEYQDTGHAQIAMLT
GLFAGGHPVTAVGDPFQSIYGWRGAAAGNIGRFADRFPLPDGSPARRYALATSWRNDAQI
LVAANEVSQSLRDDDPFAIELRPRPGAGMGEVLAAVTETVDEEARWVAETIAARWHAEPS
GTRTAAVLVRRRSQIPLIHEALLDLGLPVEVVGLGGLLTTAEVADVRATLQVLADHNAGP
ALVRLLAGARWRIGPRDLAVLGRRARSLVQVRGEGASRLPGVVTADQRVLLAAELAAAAE
NAEQGSLVEAIDDLGNPSDYSADGYERMRAMSDELRRLRRRLAAPLTELVAEVESTIGID
VEVAARADRAGVGRTHLDRLLDEAARFSVEADEVSLPAFLTFLDAAEDEENGLEQGELSV
ESERIQVLTVHGAKGLEWNMVAVPGLLEGIFPGSTVGIDWTKTKGLLPAPLRGDHADLPR
FNLTQATDRSDVSKGLKTYNDQVKARQRLEERRLAYVAFTRARSTLLVSGFCWDNTKKPR
VVSPFLAEVAEHAEVGQWFTPEPEADNPTTREPVVHAWPVDPLERRRVEVEAGAERVREQ
RRRLRESGDRDSEGVAVLPGLLGDATEETARWRRDVDLLLEERARLAATTATDVVLPSML
SVSQLVALRRSPDELARVLRRPLPVRPAPLARRGTLFHTWLEQRWSAQSLLDIDELPGAS
DVGADDADFEALRIAFDASPWAARTPIEVEVGFEMAVGSVVVRGRMDAVFGPESATPGTD
WTVVDWKTGARPHGAEAAAAAVQLAAYRLAWAQLLGIEPDDEAGLARVGAAFHYVRTNET
VRPVDLLDAAGLAALING
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacccagatcgcggtctcggctcggcagctggccggcctgctcggcctcccggcg
ccgtcggaggagcagatcgcggtaatcgagtcgccgctggagcccggtgtggtgatcgcg
ggtgccggatccgggaagacggagacgatgtccacccgcgtcgtctggctcatcgccaac
cgattggtgagccccgaccaggtgctcgggttgacgttcacccgcaaggcggcggccgag
ctgagccgccgtattcgccgtcggctcgctcagtggcgaatggtgctggagcacgagacg
ccggaggagtccgaggcgatcgccgccctgatttcgggtgagccgacggtgctgacctac
gccgcctacgccggccggctggccggtgaacacgcgatgcggctgggctccgaaccctca
ccgcagctgctgtcaccggcaatgcgctggcagttggccgacggcgtcgtgcgccgcttc
accggtgaggttccggtcgccgccggcgtgctgtcgacggtggtgaatcaggtgctcgat
ctcgccgatcagctctccgaccacctgcgcagtcccgccgagctcgaggagtattcccgg
caggacctcgcctgcttcgaggcgctgcccctgggcaagggggcgcgcgcggtcgagtac
cccggtgactcgaagaagttcatcgacgccaccgtggtgcgccgcgccctggtcccactg
cttcaggagttcgcccgggccaaggcggctcgacaggtgtcggacttcggcgaccagatg
gtgctggccgcccggttggcggagctcccggatgtaagccagatcgaacgcgaccgcttc
cgggtcgtgctcctggatgagtaccaggacaccgggcacgcccagatcgctatgctcacc
gggctcttcgccggcggccacccggtgaccgcagtcggcgacccgttccaatccatctac
ggctggcgcggtgcggccgcgggaaacatcggtcgcttcgccgaccggttccccctcccg
gacgggagcccggcccgtcgctatgcgctggcgaccagctggcgcaacgacgcccagatc
ctggtcgccgccaatgaggtgtcccagagccttcgcgacgacgacccgttcgcgatcgag
ctgcggccgcgccccggcgccggtatgggcgaggtgctggccgcggtcaccgagaccgtc
gacgaggaggcccggtgggtggccgagaccatcgcagctcgctggcacgccgaaccgtcc
ggcacccgtacggcggcggtactcgtccgccgacgatcccagatcccgctcatccacgaa
gcactgctcgatctcggtctaccggtggaggtcgtcggcctgggtggcctgctgacgacg
gccgaggtggccgacgtgcgggccacacttcaggtgctggctgatcacaacgcaggcccc
gccctcgtgcggttgctagccggtgcccggtggcggatcggtcctcgggatctggccgtg
cttgggcggcgagcccgcagcctggtgcaggtgcgcggtgagggtgcatcccggcttccc
ggcgtggttacggccgaccagcgagtcctgctcgcggctgaattggccgcagcggccgaa
aacgctgagcagggcagcctggtcgaggcgatcgacgacctgggcaacccgagcgactac
tccgctgatggctacgagcggatgcgcgcgatgtcagacgagctacgacggctgcgccgt
cggctggccgcgccactcaccgaactggtggccgaggtcgagtcgacgatcggaatcgat
gtcgaggtcgccgcccgcgccgatcgagccggcgtcggtcggacgcacctggatcggctg
ctcgacgaggcggcccgcttctccgtcgaggcggacgaggtttcactgccggctttcctg
accttcctcgacgccgccgaggacgaggagaacggcctggaacagggcgagctcagcgtc
gagtccgaacgcatccaagtcctgaccgtgcacggcgcaaagggtcttgagtggaacatg
gtcgccgtgcccggtctgctggagggcatctttcccggtagcaccgtcggtatcgactgg
accaagaccaaggggctgcttccggcgccactgcgcggcgaccatgccgacctaccgagg
ttcaacctgacccaggcgaccgatcgcagcgacgtgtcgaagggcctgaagacctacaac
gaccaggtgaaggcccggcagcgactggaggagcggcgcctggcctacgtcgccttcacc
agagctcgctccactctgctcgtcagcggattctgctgggacaacaccaagaagccgcgg
gtcgtctcgccattcctggccgaggtcgccgaacacgccgaggtcgggcagtggttcact
ccggagccggaggctgacaaccccacaacccgcgagccggtggtgcacgcgtggccggtc
gacccgctggaacggcggcgggtcgaggtggaggccggtgccgaacgggtccgggagcag
cggcggcggctgcgtgaatcgggtgatcgggatagcgagggcgtcgccgtgttgcccggt
ctgctcggcgacgccaccgaagagaccgcccgatggcgccgcgatgtcgatctgctgttg
gaggagcgggcccgactggccgccaccacggccaccgacgttgtcctgccgagcatgctc
tcggtctcgcagctggtggcgctgcgccgcagtccggacgagctggcccgtgtcctacgg
cgcccactgccagtgcgcccagcgccgctggcccgacgcggaaccctcttccacacctgg
ttggagcagcgttggtcggcgcagtccctcctcgacatcgacgagcttccgggcgcctct
gacgtgggcgccgatgacgccgacttcgaagcgctgaggatcgccttcgacgccagccca
tgggccgcacggacgccgatcgaggtggaggtcggtttcgagatggcggtcggatcggtc
gtcgttcgcgggcgtatggacgccgtattcggcccggagtcagccacccccggcaccgac
tggacggtggtcgactggaagaccggggcgcgtccgcacggggccgaagcggcggccgcc
gccgtccagctcgccgcctaccggctggcctgggcgcagttgctgggcatcgagcccgac
gacgaggcgggcctggcccgagttggggcggcgtttcactacgtgcgcaccaatgagacc
gtccgtccggtcgatctcctcgatgccgccgggctagccgcgctcatcaacggctga
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