Jatrophihabitans sp. GAS493: SAMN05892883_2515
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Entry
SAMN05892883_2515 CDS
T11165
Name
(GenBank) succinate dehydrogenase / fumarate reductase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
jat Jatrophihabitans sp. GAS493
Pathway
jat00020
Citrate cycle (TCA cycle)
jat00190
Oxidative phosphorylation
jat00650
Butanoate metabolism
jat00720
Other carbon fixation pathways
jat01100
Metabolic pathways
jat01110
Biosynthesis of secondary metabolites
jat01120
Microbial metabolism in diverse environments
jat01200
Carbon metabolism
Module
jat_M00009
Citrate cycle (TCA cycle, Krebs cycle)
jat_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
jat_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
jat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SAMN05892883_2515
00650 Butanoate metabolism
SAMN05892883_2515
09102 Energy metabolism
00190 Oxidative phosphorylation
SAMN05892883_2515
00720 Other carbon fixation pathways
SAMN05892883_2515
Enzymes [BR:
jat01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SAMN05892883_2515
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
DAO
FAD_oxidored
Thi4
GIDA
FAD_binding_3
Pyr_redox_3
NAD_binding_8
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
SOD73224
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Position
I:complement(2658885..2660786)
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AA seq
633 aa
AA seq
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MSAEVETHDYDVLIIGAGGAGLRAAIAAREEGMRTAIICKSLFGKAHTVMAEGGIAASMG
NVNSHDNWQVHFRDTMRGGKFLNSWRMAELHAKEAPDRVWELETYGALFDRTKDGKISQR
NFGGHEYPRLAHVGDRTGLELIRTLQQKIVSLQQEDLREAGDLDARLKVFAECTITELLR
SPTGAISGAFGYWRESGRFVLFRAPAVVLATGGVGKSFKVTSNSWEYTGDGHALALRAGS
SLLNMEFIQFHPTGMVWPPSVKGILVTESVRGDGGVLRNSDGKRFMFDYVPDVFRGQYAD
NEAEADRWYDDPDNNKRTPDLLPRDEVARAINSEVKAGRGSPHGGVFLDIASRRTPAEIL
KRLPSMHHQFKELADVDITSEPMEVGPTCHYVMGGVEVDPDTAAAARVPGLFAAGEVAGG
MHGSNRLGGNSLSDLLVFGRRAGVGSAQYVKSLGHDRPQVSPEQVDAASSNALAPFANEG
GENPYTLHQELQQTMNDLVGIIRKAAEVEQALAKLQELKARARTVTVEGHRQFNPGWHLA
LDLRNMLAVSECVARAALIREESRGGHTRDDFPKMDPNWRRVNLICSLSGDGIDVVRQPM
STMRDDLISLFARDELGKYLTEEELTALPEVSE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgaggtagagacgcacgactatgacgtcctgatcatcggggctggaggcgcc
gggttgcgggcggccatcgcggcacgggaggaggggatgcggaccgcgatcatctgcaag
tccctcttcggcaaggcccacacggtgatggccgagggcgggatcgcggccagcatgggc
aacgtcaactcccacgacaactggcaggtccacttccgcgacaccatgcgaggcggcaag
ttcctcaactcgtggcggatggccgaactgcacgccaaggaggcgcccgaccgggtctgg
gagctggagacctacggcgcgctcttcgaccgcacgaaagacggcaagatcagtcagcgg
aacttcgggggtcacgagtatccacggctggcccacgtcggcgatcgcaccggtctggag
ctcatccgcacgctgcagcagaagatcgtctcgctgcagcaggaggatctgcgcgaggcc
ggcgacctcgacgcccgtctgaaggtgttcgccgagtgcaccatcaccgaactgctgcgc
agccccaccggggcgatctccggcgccttcgggtattggcgggaatccggacggttcgtg
ctcttccgggctccggccgtcgtgctggccaccggcggcgtcggcaagtcgttcaaggtc
acctcgaactcctgggagtacaccggcgacgggcacgccctggccctgcgggccggctcg
tcgttgctgaatatggagttcatccagttccatccgaccggcatggtctggccaccgtcg
gtgaagggcatcctggtcaccgaatccgtccgcggcgacggcggggtgctgcgcaactcc
gatggcaagcgcttcatgttcgactacgtccccgacgtcttccgcggtcagtacgccgac
aacgaggccgaggctgatcgctggtacgacgacccggacaacaacaagcgcacccccgac
ctgctcccccgcgatgaggtggcccgggccatcaactccgaggtgaaggccggccggggc
tcaccgcacggcggtgtcttcctcgacatcgcctcccgccgtacgccggccgagatcctc
aagcggctgccgtcgatgcaccatcaattcaaggaactcgccgacgtcgacatcacctcc
gagccgatggaggtcggcccgacctgtcactacgtgatgggcggtgtcgaggtcgatccc
gacaccgcggcggcggcccgggtccccggactcttcgcggccggcgaggtggccggcggt
atgcacgggtcgaatcggctcggtggcaactcgctatcggacctactcgtcttcggccgt
cgagccggcgtcggctccgcgcagtacgtgaaatcgctcggccacgatcggccccaggtc
agcccggagcaggtcgatgcggccagcagtaacgctctggcgccattcgccaatgaaggc
ggggagaatccgtacaccctgcaccaggaactgcagcagacgatgaacgacctggtcggg
atcatccgcaaggcggccgaggttgagcaagccctggccaagctgcaggagctgaaggca
cgcgcccgcaccgtcaccgtcgaggggcaccggcaattcaatcccggttggcatctggcc
ctggatctgcgcaacatgctggcggtcagcgagtgcgtggcccgggccgcgctgatacgc
gaggagagccggggcggccacacccgcgacgacttcccgaagatggatccgaactggcgt
cgggtgaacctgatctgctcgctgagcggcgatggcatcgatgtggtgcgccagccgatg
tcgacgatgcgcgacgacctgatctcgctcttcgcccgtgacgaactgggcaagtacctc
accgaggaagaactcaccgcgctgccggaggtgtccgaatga
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